Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq13721 96.9 4e-15
seq18258 93.3 5e-14
seq6039 93.3 5e-14
seq6484 91.5 2e-13
seq6010 91.5 2e-13
seq5906 91.5 2e-13
seq5001 91.5 2e-13
seq3864 91.5 2e-13
seq2300 91.5 2e-13
seq1133 91.5 2e-13
seq10726 89.7 6e-13
>seq13721
Length=14796
Score = 96.9 bits (106), Expect = 4e-15
Identities = 68/78 (87%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120
|||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||
Sbjct 3021 ATTTACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAAC 3080
Query 60121 CACTATACTACCGAGGAT 60138
|||||||||| |||||||
Sbjct 3081 CACTATACTATCGAGGAT 3098
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 11812 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 11871
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 11872 ATACTATCGAGGAT 11885
>seq18258
Length=2218
Score = 93.3 bits (102), Expect = 5e-14
Identities = 69/80 (86%), Gaps = 2/80 (3%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 358 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 299
Query 60126 TACTACCGAGGA--TTGAAT 60143
||||| |||||| ||||||
Sbjct 298 TACTATCGAGGATGTTGAAT 279
>seq6039
Length=17770
Score = 93.3 bits (102), Expect = 5e-14
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121
||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||
Sbjct 7928 TTTACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACC 7987
Query 60122 ACTATACTACCGAGGATTG 60140
||||||||| |||||| ||
Sbjct 7988 ACTATACTATCGAGGACTG 8006
>seq6484
Length=17301
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 3181 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 3122
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 3121 TACTATCGAGGAT 3109
>seq6010
Length=23151
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 9299 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 9240
Query 60126 TACTACCGAGGATTG 60140
||||| |||||| ||
Sbjct 9239 TACTATCGAGGACTG 9225
>seq5906
Length=4660
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 636 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 695
Query 60126 TACTACCGAGGATTG 60140
||||| |||||| ||
Sbjct 696 TACTATCGAGGACTG 710
>seq5001
Length=39483
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 1450 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 1391
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 1390 TACTATCGAGGAT 1378
>seq3864
Length=45110
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 22402 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 22343
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 22342 TACTATCGAGGAT 22330
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 22713 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 22772
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 22773 TACTATCGAGGAT 22785
>seq2300
Length=28033
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 5058 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 5117
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 5118 TACTATCGAGGAT 5130
>seq1133
Length=8192
Score = 91.5 bits (100), Expect = 2e-13
Identities = 68/79 (86%), Gaps = 2/79 (3%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 474 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 533
Query 60126 TACTACCGAGGA--TTGAA 60142
||||| |||||| |||||
Sbjct 534 TACTATCGAGGACCTTGAA 552
>seq10726
Length=2358
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 803 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 744
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 743 TACTATCGAGGA 732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571678412448440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |