Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq17788 109 8e-19 >seq17788 Length=7208 Score = 109 bits (120), Expect = 8e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 146050 TCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGA 146109 |||||| | ||| | || |||||||| ||||| |||||||| ||||||||||| || Sbjct 2425 TCCACCACGAAGGCGCAAAACCAAATGCAAAGTCGATTCTTTCTGGATATTATAATCAGA 2366 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 || |||| | ||| || || ||||| |||||||| || | | ||| ||||| ||||| Sbjct 2365 GAGTGTTCGACCATCTTCCAACTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGAGG 2306 Query 146170 AATTCCTTCTTTATCTTG 146187 |||||||||||| || || Sbjct 2305 AATTCCTTCTTTGTCCTG 2288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743345416380160