Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq489 82.4 6e-11 >seq489 Length=77466 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 ||||||| || || || || || ||||||||||||||||||| | ||| | |||| Sbjct 4409 AGTACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCGGAAAGTGTGCGTCCATCT 4468 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| ||| ||||| ||| |||| || | ||||| || ||| | ||| || || || Sbjct 4469 TCCAGTTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCTGGGGGAATGCCCTCTTTGTCC 4528 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | |||||| | | | |||||| ||||| || | ||| ||| | Sbjct 4529 TGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAAGGCTCAACCTCCAAGGTAATGGTC 4588 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 || ||||| | ||||| || || || |||||||| Sbjct 4589 TTACCGGTGAGAGTTTTGACGAATATCTGCATTTT 4623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379253971355385