Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq6120 127 2e-24
>seq6120
Length=7451
Score = 127 bits (140), Expect = 2e-24
Identities = 197/279 (71%), Gaps = 8/279 (3%)
Strand=Plus/Minus
Query 20928 GGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGG 20987
|| || | |||||| |||| || || || || || | ||||| || |||||||||||
Sbjct 5025 GGTTCTATGTGGTTACTGTAGACATGAGCATCGCCAAGCGTGTGAACGAAGTCTCCCGGT 4966
Query 20988 GTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAAC 21047
| |||||||| || ||||| |||| ||||| || || || || ||||||||||||
Sbjct 4965 TTAAGGCCCGTCACATGAGCTATCATGTACGTAAGCAGTGCATACGAGGCGATGTTAAAG 4906
Query 21048 GGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGA 21107
|| || || || ||||| || ||| | || ||||||||||| |||| ||| || ||
Sbjct 4905 GGCACACCCAGACCCATATCTGCGCTGCGTTGATACAGCTGGCAAGACAACTCACCGCGT 4846
Query 21108 GCC------ACGTAAAACTGACACAAAAC-GTGACAAGGAGGGAGAGCCATCCGCGCGAG 21160
| | ||||| || ||| ||| || || || || || | |||||| ||| |
Sbjct 4845 GTCGTTGATACGTAGAATTGA-GCAAGACAATGGCATGGTGGCAATGCCATCTGCGGTAT 4787
Query 21161 GTCCGCGGGGTTCCACGCGCACATAACGATGCGCCGATC 21199
||| |||||||| ||| |||||| || || |||||
Sbjct 4786 ATCCAAAGGGTTCCAAGCGGACATAATAATCCGACGATC 4748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427674477125040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |