Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq17788 116 4e-21
>seq17788
Length=7208
Score = 116 bits (128), Expect = 4e-21
Identities = 157/217 (72%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029
|||||||| ||||| | || |||||||| || || || ||||| | ||| ||||
Sbjct 2412 CGCAAAACCAAATGCAAAGTCGATTCTTTCTGGATATTATAATCAGAGAGTGT--TCGAC 2355
Query 143030 --TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTT 143087
||||| | ||||| |||||| |||| |||||||| ||||| ||||| || |||||||
Sbjct 2354 CATCTTCCAACTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGAGGAATTCCTTCTT 2295
Query 143088 TGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCA 143147
|||| ||| || ||| | | ||| | ||||||| ||||| || |||| ||| |
Sbjct 2294 TGTCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGAAGGTTCGACCTCAAGAGTGA 2235
Query 143148 CCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
||||| || || | ||||| || || || |||||
Sbjct 2234 TGGTCTTACCCGTGAGGGTTTTAACAAAAATCTGCAT 2198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506890986357360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |