Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_004629.1
Length=280334
Score E
Sequences producing significant alignments: (Bits) Value
seq6703 98.7 2e-15
seq11388 84.2 4e-11
>seq6703
Length=82049
Score = 98.7 bits (108), Expect = 2e-15
Identities = 78/93 (84%), Gaps = 3/93 (3%)
Strand=Plus/Minus
Query 271736 GAATATGGCTCCGTGACCTGGACTCGAACCAGGGACCCAGTGATTAACAGTCACTTGCTC 271795
|||||||||||| ||||||| ||||||||||||||| ||||||||||| | ||||
Sbjct 37773 GAATATGGCTCCCCGACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTC 37714
Query 271796 TACCGACTGAGCTATCACGGAATTAAATGGCGC 271828
|||| |||||||||||| ||||| |||||||
Sbjct 37713 TACCAACTGAGCTATCAGGGAAT---ATGGCGC 37684
>seq11388
Length=34222
Score = 84.2 bits (92), Expect = 4e-11
Identities = 68/81 (84%), Gaps = 1/81 (1%)
Strand=Plus/Minus
Query 273267 AAAATGGTCGGAGTGGGGAGACTCGAACTCCCGACATCCTGCTCCCAAAGCAGGCGCGCT 273326
||||||||||||| || | || |||||||| |||| ||||||||||||||| |||||
Sbjct 17093 AAAATGGTCGGAGCGGCGGGATTCGAACTCGCGACCCTCTGCTCCCAAAGCAGATGCGCT 17034
Query 273327 ACCA-ACTGCGCTACACTCCG 273346
|||| ||||||||| |||||
Sbjct 17033 ACCAGGCTGCGCTACGCTCCG 17013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 896722473397520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |