Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq489 82.4 6e-11
>seq489
Length=77466
Score = 82.4 bits (90), Expect = 6e-11
Identities = 148/216 (69%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC--- 18889
|||| |||| || |||||||||||||| ||||| || | | ||| ||||||
Sbjct 4412 ACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCGGAAAGTGT----GCGTCCATC 4467
Query 18890 -TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTC 18948
||||| || || || ||| | || || | ||| || || ||| | ||||||||||||
Sbjct 4468 TTCCAGTTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCTGGGGGAATGCCCTCTTTGTC 4527
Query 18949 GGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGT 19008
|| || || || | ||| || || |||||| || | |||||||||
Sbjct 4528 CTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAAGGCTCAACCTCCAAGGTAATGGT 4587
Query 19009 TTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044
||||| || | ||||||||| || || ||||||||
Sbjct 4588 CTTACCGGTGAGAGTTTTGACGAATATCTGCATTTT 4623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414474410603362
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |