Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq489 82.4 6e-11 >seq489 Length=77466 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/216 (69%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC--- 18889 |||| |||| || |||||||||||||| ||||| || | | ||| |||||| Sbjct 4412 ACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCGGAAAGTGT----GCGTCCATC 4467 Query 18890 -TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTC 18948 ||||| || || || ||| | || || | ||| || || ||| | |||||||||||| Sbjct 4468 TTCCAGTTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCTGGGGGAATGCCCTCTTTGTC 4527 Query 18949 GGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGT 19008 || || || || | ||| || || |||||| || | ||||||||| Sbjct 4528 CTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAAGGCTCAACCTCCAAGGTAATGGT 4587 Query 19009 TTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 ||||| || | ||||||||| || || |||||||| Sbjct 4588 CTTACCGGTGAGAGTTTTGACGAATATCTGCATTTT 4623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414474410603362