Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq489 87.8 2e-12 >seq489 Length=77466 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTC 48576 || ||||| || || |||||||||||||||||| || | || ||| || | || || Sbjct 4412 ACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTC-GGAAAGTGTGCGTCCATCTTC 4470 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||| ||||| ||| | | || | |||||| || || || | | || |||||| Sbjct 4471 CAGTTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTG 4530 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || ||||| | | | ||||| || | || ||| ||| | || ||||| || Sbjct 4531 GATCTTAGCCTTGACATTCTCGATGGTGTCAGAAGGCTCAACCTCCAAGGTAATGGTCTT 4590 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||||||||||||| || || |||||||| Sbjct 4591 ACCGGTGAGAGTTTTGACGAATATCTGCAT 4620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421151225637473