Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_005905.1
Length=86462
Score E
Sequences producing significant alignments: (Bits) Value
seq5254 122 5e-23
>seq5254
Length=91375
Score = 122 bits (134), Expect = 5e-23
Identities = 158/218 (72%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 3851 ATTATGAAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCG 3910
|||||||| |||| || | || |||||||| | ||||| || || || |||||
Sbjct 5317 ATTATGAAGCATACACCAG---AGGGCGTACATTTCGTTATGGCCGATGGCGGTTTCTCC 5373
Query 3911 GTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGT 3970
|||||||| ||||||||||| |||||||| ||||| || | |||| | ||||| |||
Sbjct 5374 GTTGAGGGACAAGAAAATATACAAGAAATTTTATCAAAGCAATTGTACCTCTGTCAGTGT 5433
Query 3971 TTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATA 4030
|| | ||||||| || |||| | ||| || ||| ||| | ||||||||
Sbjct 5434 TTGACGGCATTGAAAATATTACGCACAAATGGAAGTTTTGTATGTAAACTATTCGATATC 5493
Query 4031 TTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTA 4068
||||| || ||||||| ||| | || |||||||||||
Sbjct 5494 TTTACGCCGTTTAGTGTCGGTCTTGTTTATTTGATGTA 5531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 276487966311919
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |