Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq17788 154 1e-32
>seq17788
Length=7208
Score = 154 bits (170), Expect = 1e-32
Identities = 166/218 (76%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851
||||| ||||| |||||||| ||||| || || | |||||||| | |||||| ||
Sbjct 2412 CGCAAAACCAAATGCAAAGTCGATTCTTTCTGGATATTATAATCAG--AGAGTGTTCGAC 2355
Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
||| |||| |||||| || ||||||||| | ||| |||||||||||||| |||||||
Sbjct 2354 CATCTTCCAACTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGAGGAATTCCTTCTT 2295
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
|||| | ||| || || ||||| ||| |||||| | | ||||| |||| ||||
Sbjct 2294 TGTCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGAAGGTTCGACCTCAAGAGTGA 2235
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
|||| || || || || ||||| ||||| |||||||||
Sbjct 2234 TGGTCTTACCCGTGAGGGTTTTAACAAAAATCTGCATG 2197
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448182080318280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |