Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_006635.1
Length=29874
Score E
Sequences producing significant alignments: (Bits) Value
seq15965 84.2 4e-12
seq305 84.2 4e-12
seq1832 80.6 5e-11
>seq15965
Length=2433
Score = 84.2 bits (92), Expect = 4e-12
Identities = 84/105 (80%), Gaps = 3/105 (3%)
Strand=Plus/Plus
Query 3732 AGGGGACATCCATTAATTACGTGAGCTCAGAATGAGGGG-GGAGGGGTCCAATGAAATCT 3790
||||||| ||||| ||||||||||| | | ||| ||||| || ||||| || ||||||
Sbjct 653 AGGGGACGTCCATAAATTACGTGAGAT-AAAATTAGGGGAGGGGGGGTTCAGCAAAATCT 711
Query 3791 CACTAAATCTCATCTAAGCCGAGGGGGAGATAATCAAAAATCTCA 3835
||| |||||||| ||| | |||||||| || |||| | ||||||
Sbjct 712 CACCAAATCTCACCTAGGGGGAGGGGGA-ATCATCAGACATCTCA 755
>seq305
Length=56600
Score = 84.2 bits (92), Expect = 4e-12
Identities = 83/105 (79%), Gaps = 2/105 (2%)
Strand=Plus/Minus
Query 3731 AAGGGGACATCCATTAATTACGTGAGCTCAGAATGAGGGGGGAGGGGTCCAATGAAATCT 3790
|||||||| ||||| ||||||||||| | | ||| ||||| | ||||| || ||||||
Sbjct 41187 AAGGGGACGTCCATAAATTACGTGAGATAA-AATTAGGGGAGGGGGGTTCAGGAAAATCT 41129
Query 3791 CACTAAATCTCATCTAAGCCGAGGGGGAGATAATCAAAAATCTCA 3835
||| |||||||||||| | ||||||| | | ||| | ||||||
Sbjct 41128 CACCAAATCTCATCTAGGGGGAGGGGG-GTTCATCGGACATCTCA 41085
>seq1832
Length=6640
Score = 80.6 bits (88), Expect = 5e-11
Identities = 70/87 (80%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 3731 AAGGGGACATCCATTAATTACGTGAGCTCAGAATGAGGGGGGAGGGGTCCAATGAAATCT 3790
|||||||| ||||| ||||||||||| | | | ||||||||||||| || ||||||
Sbjct 2126 AAGGGGACGTCCATAAATTACGTGAGATAAATTTAGGGGGGGAGGGGTCTAACTAAATCT 2067
Query 3791 CACTAAATCTCATCTAAGCCGAGGGGG 3817
||| |||||||| ||| | |||||||
Sbjct 2066 CACCAAATCTCACCTATGGGGAGGGGG 2040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 95453122135736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |