Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq851 174 2e-39
seq12290 95.1 2e-15
>seq851
Length=49102
Score = 174 bits (192), Expect = 2e-39
Identities = 201/268 (75%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|||||||||||||||| | ||||| |||||||||||||| || || || ||||||||
Sbjct 3734 GCTAAGCGTCATCGCAAAGTGCTTCGTGATAACATCCAAGGCATTACGAAACCAGCTATT 3793
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||| |||||||||||||||| || || ||| | ||||| | ||||||| || | |
Sbjct 3794 CGTCGTTTGGCTCGTCGTGGTGGTGTAAAACGTATTTCTGGTCTCATCTATGAGGAAACT 3853
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611
|||| ||| | || | || | | | ||| || | ||||||| || || || || ||
Sbjct 3854 CGTGGTGTGCTAAAAGTGTTTTTGGAAAACGTCATTCGTGATGCTGTTACA-TACACTGA 3912
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||||| | ||||| || || |||||||| ||||||| ||| |||| | |||||
Sbjct 3913 ACACGCTAAGAGGAAGACAGTGACTGCCATGGATGTCGTCTACGCACTGAAGAGACAAGG 3972
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || || ||||| |||||
Sbjct 3973 CCGCACTTTGTACGGCTTTGGTGGTTAA 4000
>seq12290
Length=34386
Score = 95.1 bits (104), Expect = 2e-15
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| || || ||||||| | | || |||||||| || || || |||||||| |||||
Sbjct 451 GCAAAACGCCATCGCAAGGTTTTGCGTGATAACATTCAGGGCATTACCAAGCCTGCTATT 510
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| || ||||||||||||| ||||| ||||| | || || ||| ||||||| || | |
Sbjct 511 CGCCGCTTGGCTCGTCGTGGCGGAGTTAAGCGCATTTCGGGCTTGATCTATGAGGAAACT 570
Query 16553 CGTGATGTTTTGAAG 16567
|||| || ||||||
Sbjct 571 CGTGGAGTGTTGAAG 585
Score = 95.1 bits (104), Expect = 2e-15
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637
||| ||| || | ||||| || ||| || |||||||||||||| ||||| || |||
Sbjct 664 AGAACGTCATTCGCGATGCCGTCACCTACACTGAGCACGCTAAACGCAAGACGGTTACCG 723
Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697
||||||| |||| ||||| |||||||| |||||||| | |||| ||||| || |||
Sbjct 724 CCATGGACGTCGTATATGCTTTGAAACGCCAAGGCCGCACTCTTTACGGTTTCGGTGGTT 783
Query 16698 AA 16699
||
Sbjct 784 AA 785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79057395699789
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |