Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq851 174 2e-39 seq12290 95.1 2e-15 >seq851 Length=49102 Score = 174 bits (192), Expect = 2e-39 Identities = 201/268 (75%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||||||||||| | ||||| |||||||||||||| || || || |||||||| Sbjct 3734 GCTAAGCGTCATCGCAAAGTGCTTCGTGATAACATCCAAGGCATTACGAAACCAGCTATT 3793 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||| |||||||||||||||| || || ||| | ||||| | ||||||| || | | Sbjct 3794 CGTCGTTTGGCTCGTCGTGGTGGTGTAAAACGTATTTCTGGTCTCATCTATGAGGAAACT 3853 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611 |||| ||| | || | || | | | ||| || | ||||||| || || || || || Sbjct 3854 CGTGGTGTGCTAAAAGTGTTTTTGGAAAACGTCATTCGTGATGCTGTTACA-TACACTGA 3912 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||||| | ||||| || || |||||||| ||||||| ||| |||| | ||||| Sbjct 3913 ACACGCTAAGAGGAAGACAGTGACTGCCATGGATGTCGTCTACGCACTGAAGAGACAAGG 3972 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | || || ||||| ||||| Sbjct 3973 CCGCACTTTGTACGGCTTTGGTGGTTAA 4000 >seq12290 Length=34386 Score = 95.1 bits (104), Expect = 2e-15 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || || || ||||||| | | || |||||||| || || || |||||||| ||||| Sbjct 451 GCAAAACGCCATCGCAAGGTTTTGCGTGATAACATTCAGGGCATTACCAAGCCTGCTATT 510 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || ||||||||||||| ||||| ||||| | || || ||| ||||||| || | | Sbjct 511 CGCCGCTTGGCTCGTCGTGGCGGAGTTAAGCGCATTTCGGGCTTGATCTATGAGGAAACT 570 Query 16553 CGTGATGTTTTGAAG 16567 |||| || |||||| Sbjct 571 CGTGGAGTGTTGAAG 585 Score = 95.1 bits (104), Expect = 2e-15 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| || | ||||| || ||| || |||||||||||||| ||||| || ||| Sbjct 664 AGAACGTCATTCGCGATGCCGTCACCTACACTGAGCACGCTAAACGCAAGACGGTTACCG 723 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 ||||||| |||| ||||| |||||||| |||||||| | |||| ||||| || ||| Sbjct 724 CCATGGACGTCGTATATGCTTTGAAACGCCAAGGCCGCACTCTTTACGGTTTCGGTGGTT 783 Query 16698 AA 16699 || Sbjct 784 AA 785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79057395699789