Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq9537 96.9 6e-15 >seq9537 Length=49915 Score = 96.9 bits (106), Expect = 6e-15 Identities = 185/268 (69%), Gaps = 10/268 (4%) Strand=Plus/Minus Query 156814 CCAGAGATTCTTAATGGAAGAGTGAAGACATTACATCCAAAGATTCATGGTGGTATTCTT 156873 ||||| || ||| ||||| | || || || | |||||||| | || | ||| | || Sbjct 18589 CCAGAAATGCTTGATGGACGTGTCAAAACGCTGCATCCAAACGTACACGCTGGCTTACTG 18530 Query 156874 GCACAGCGTGGTAATCCTGTACATGATATGGATCGTAATGCAAATGATATTGGATTGATT 156933 ||| | | | |||| ||||| || || | |||||| | || | |||||| Sbjct 18529 GCAAGAAGAGATCTACCTGAACATGTTAAGGCGC----TGCAAACGC-ATGGTATTGATG 18475 Query 156934 G-ATA---TTGTTGCAG-TAAACTTATATCCTTTCGCAGAAACAGTTGCTAAACCAGATG 156988 | ||| |||||| | | || | || || |||| ||||| || || || || ||| Sbjct 18474 GTATAGACTTGTTGGTGGTGAATCTTTACCCATTCGAGGAAACCGTCGCCAAGTCAAATG 18415 Query 156989 TAACTCTTGCAGATGCAATAGAGAATATTGATATTGGTGGTCCTAGTATGGTGAGATCAG 157048 | || || || |||||||| || |||||||||||||| |||||| |||||| | | Sbjct 18414 TGACGCTGGCTGATGCAATCGAAAATATTGATATTGGCGGTCCTGCCATGGTGCGTAGTG 18355 Query 157049 CAGCAAAGAATTATAAGGATGTTGCTGT 157076 |||| || |||||| | ||||||||||| Sbjct 18354 CAGCTAAAAATTATCAAGATGTTGCTGT 18327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807358630969880