Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq1420 96.9 1e-15 >seq1420 Length=85926 Score = 96.9 bits (106), Expect = 1e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 32938 GACTTCGGTAGTGAACCGATTCTGTCCACTTTGGTCCTGCCATTTTCTTGTCCGCAATTT 32997 ||||||||| || | || | || ||||||||||| |||||||| | ||| |||||| | Sbjct 64760 GACTTCGGTTATGTAACGGTCTTGACCACTTTGGTCTTGCCATTTACGTGTACGCAATCT 64701 Query 32998 GCCTTCAAGATAAACCTCAGAGCCTTTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTT 33057 |||||||| |||||| |||||||| || ||||| | ||||||||| ||||| Sbjct 64700 GCCTTCAATATAAACGGGTGAGCCTTTACGTAGATATTGCGAGGCAATTTCAGCCAGACG 64641 Query 33058 CCCGCTCATCACCACACGGTGCCACTCCGTCTGCTC 33093 | || | || | | ||||||||| || ||||| Sbjct 64640 GTCACTGAAAACAATATTGTGCCACTCTGTGTGCTC 64605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149923723338412