Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq12041 104 2e-17
seq17788 100 3e-16
>seq12041
Length=12732
Score = 104 bits (114), Expect = 2e-17
Identities = 203/300 (68%), Gaps = 0/300 (0%)
Strand=Plus/Minus
Query 71671 AACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCA 71730
||| || ||||| ||||||| ||||| ||| || || | || | |||||| ||
Sbjct 5061 AACTCACGATGATTTATGGAACGCTGCACAGTTGCAACTTGTAAGCGAAGCTAAAATGCA 5002
Query 71731 CGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCA 71790
|| | | |||||||| ||||| |||||||| || || ||| | |||| || |||||
Sbjct 5001 TGGCTTTTTGCGCATGTATTGGGCAAAAAAGATACTTGAATGGGCAGAAACGCCGGAGCA 4942
Query 71791 GGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAA 71850
||| | || || |||| || || |||| || || | || || | ||||| ||
Sbjct 4941 GGCTTTGGAATACGCTATACTGCTTAATGATAAGTATAGCTTAGATGGAAGGGATCCGAA 4882
Query 71851 CGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGAAGCTTTTTAGAACG 71910
||||| || |||||||||||| |||| | ||| | || || | | | || |
Sbjct 4881 TGGTTACGTGGGTTGCATGTGGTCCATTGGTGGTATACATGACCAAGGATGGGCCGAGAG 4822
Query 71911 TCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAATGT 71970
| || ||||| ||| | |||||||||||| | | || || | || |||||| ||||
Sbjct 4821 GCCTGTCTTTGGCAAAGTGCGCTATATGAATTATCAGGGATGTAAGCGAAAGTTCGATGT 4762
>seq17788
Length=7208
Score = 100 bits (110), Expect = 3e-16
Identities = 162/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 26764 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAAT 26823
|||| ||||| | ||||| ||||| | || || || | ||||| | || | |||
Sbjct 2193 ACAACATGCAGATTTTTGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAAC 2252
Query 26824 CAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCG 26883
| ||||| ||||| | |||||| |||||| ||||||||||| || ||||| |
Sbjct 2253 CTTCGGACACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAG 2312
Query 26884 ATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACT 26943
|||||||| | || || | | |||||||| | ||||||| | ||| || || |
Sbjct 2313 ATCAACAACGTCTAATCTTTGCTGGCAAACAGTTGGAAGATGGTCGAACACTCTCTGATT 2372
Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA 26996
|||| || || |||||||| ||| | ||| |||| || | ||| | || |||
Sbjct 2373 ATAATATCCAGAAAGAATCGACTTTGCATTTGGTTTTGCGCCTTCGTGGTGGA 2425
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478545887588560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |