Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq489 116 3e-21
>seq489
Length=77466
Score = 116 bits (128), Expect = 3e-21
Identities = 160/221 (72%), Gaps = 12/221 (5%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
||||||| |||||| || ||||||||||| ||||||||||||| | || ||||||
Sbjct 4409 AGTACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCGGAAAGTGT----GCGTCC 4464
Query 16784 ----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTT 16839
|||| ||| ||||| ||| | || || ||||||||||| || | |||||||||
Sbjct 4465 ATCTTCCAGTTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCTGGGGGAATGCCCTCTTT 4524
Query 16840 GTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTG 16897
||| || || || ||| || | | | ||||| ||||| |||| |||
Sbjct 4525 GTCCTGGATCTTAGC--CTTGACATTCTCGATGGTGTCAGAAGGCTCAACCTCCAAGGTA 4582
Query 16898 ATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938
||||| || ||||| || |||||||| || |||||||||||
Sbjct 4583 ATGGTCTTACCGGTGAGAGTTTTGACGAATATCTGCATTTT 4623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404991861604270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |