Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq15440 89.7 6e-13 seq68 84.2 2e-11 >seq15440 Length=3601 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 127538 GGTTTGCACGGGTTACACGTGCACGAGTTCGGCGACACGTCGAACGGTTGCACGTCGGCG 127597 ||| ||||||| || || |||||||||||||| |||| | || |||||||| ||||| Sbjct 1074 GGTCTGCACGGATTCCATGTGCACGAGTTCGGTGACAATACCAATGGTTGCACATCGGCT 1015 Query 127598 GGGGAACACTTCAATCCCACCGGTATGGATCACGGAGCGCCCAACGCGCTCGTTCGTCAC 127657 || ||| ||||||||| | |||| || || || || | || || |||||||| Sbjct 1014 GGTCCACATTTCAATCCCTTAAATCTGGAGCATGGCGCCCCTACCGATCTGGTTCGTCAT 955 Query 127658 GTTGGCGACCTGGGCAA 127674 ||||||| ||||||| Sbjct 954 ATTGGCGATTTGGGCAA 938 >seq68 Length=46360 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 38457 ATGAAGCAGACGCCGCAACAGTTGGCCGAGGCCGGCTTCTACTATTCGGGCACCGGAGAC 38516 ||||| |||| || || || || || || || ||||||| |||| | || |||| || Sbjct 7730 ATGAAACAGAAACCACATCAATTAGCAGAAGCGGGCTTCTTCTATACTGGTTCCGGTGAT 7671 Query 38517 CAGGTCAAATGTTTCTTTTGCGGCGGCGGCCTTAAGGACTGGGAGCCTGCGGACGATCCG 38576 | |||||||| || ||| ||||| ||||| ||||||||||| || |||| | || Sbjct 7670 CGTGTCAAATGCTTTAGTTGTGGCGGTGGCCTCAAGGACTGGGATGATGAGGACAAGCCC 7611 Query 38577 TGGGCGCAGCACGC 38590 |||| |||||||| Sbjct 7610 TGGGAACAGCACGC 7597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537472340661080