Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq17788 102 7e-17
>seq17788
Length=7208
Score = 102 bits (112), Expect = 7e-17
Identities = 163/232 (70%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 111184 AAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111243
|| ||||| |||||||| ||||| | || || || ||||| || | || |||||
Sbjct 2195 AACATGCAGATTTTTGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCT 2254
Query 111244 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111303
|| || | | | || ||| || ||| ||||||||||| |||| |||
Sbjct 2255 TCGGACACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGAT 2314
Query 111304 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATT 111361
|||||| | || || | ||| |||||||| ||||||||| || || ||| | | ||||
Sbjct 2315 CAACAACGTCTAATCTTTGCTGGCAAACAGTTGGAAGATGGTCGAACACTCT--CTGATT 2372
Query 111362 ATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
||||||| || |||||||| || | ||||| || ||||| || || |||||
Sbjct 2373 ATAATATCCAGAAAGAATCGACTTTGCATTTGGTTTTGCGCCTTCGTGGTGG 2424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422939601106600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |