Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq1062 98.7 2e-17 >seq1062 Length=46490 Score = 98.7 bits (108), Expect = 2e-17 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393 || ||| ||| |||||||| | |||| |||||| || |||||||||||||| || Sbjct 7308 CCGATGGCGCGCGTCTTTCCGAAGGTCACGAAATGTACATTCCACAAATACGGTCCATCC 7249 Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453 ||||| || | || | ||| || || ||| | | ||| |||| | |||||||||||| Sbjct 7248 GGCTCGGTGCAGAAGTTCGACGGTCTATGCGTGTTGCCGCTGAACATTGTCAACGAGAAG 7189 Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTC 3480 || || | ||||| |||||||||||| Sbjct 7188 ATTTATGTGTTCCTGTGGTTCTGGTTC 7162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12477341935500