Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_008953.1
Length=3935
Score E
Sequences producing significant alignments: (Bits) Value
seq1062 98.7 2e-17
>seq1062
Length=46490
Score = 98.7 bits (108), Expect = 2e-17
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393
|| ||| ||| |||||||| | |||| |||||| || |||||||||||||| ||
Sbjct 7308 CCGATGGCGCGCGTCTTTCCGAAGGTCACGAAATGTACATTCCACAAATACGGTCCATCC 7249
Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453
||||| || | || | ||| || || ||| | | ||| |||| | ||||||||||||
Sbjct 7248 GGCTCGGTGCAGAAGTTCGACGGTCTATGCGTGTTGCCGCTGAACATTGTCAACGAGAAG 7189
Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTC 3480
|| || | ||||| ||||||||||||
Sbjct 7188 ATTTATGTGTTCCTGTGGTTCTGGTTC 7162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12477341935500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |