Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_009016.1
Length=38197
Score E
Sequences producing significant alignments: (Bits) Value
seq17700 82.4 2e-11
>seq17700
Length=9767
Score = 82.4 bits (90), Expect = 2e-11
Identities = 177/263 (67%), Gaps = 4/263 (2%)
Strand=Plus/Plus
Query 25223 AATTGGCAGCTCGTACCCTTCGAGGGCTT--GCATCACTTCGCCGCTGAGGCGGGTGTTT 25280
||| |||||| |||| || | || || | ||| || ||||||| | ||||||| |
Sbjct 8715 AATGGGCAGCGCGTAGCCGACCAGCGCGTCGGCA--ACCTCGCCGCCAATGCGGGTGCCT 8772
Query 25281 TTGATTGCTCGGCTGATGACGAACGCGCCGCGAGGGTGGCCGTCAGTCACTTCCTGGCGA 25340
||||| || | | | ||||| || | | | | ||||| || ||||| |||
Sbjct 8773 TTGATCGCCCTGGACACCACGAAAGCCGCTTGCAGCTTCCCGTCCGTGACTTCGATGCGC 8832
Query 25341 GCCTTGAGCAGTTCCACAAGGTCAGAGCAGGCCCAGATGTCATAGGGGCTCGGCTGAACA 25400
||||| ||| ||||||||||| | |||||| ||||||||||| ||||| ||
Sbjct 8833 TGCTTGACCAGCTCCACAAGGTCGGCCGTGGCCCAAATGTCATAGGGCGATGGCTGCACC 8892
Query 25401 GGAATCAGAACCACATCGGCGGCACGCACGGCCGCGGCTGCCAGTTCGCTCACTTGCGGG 25460
|||||||| || | ||||| || | ||||| | ||||| ||| | | || ||
Sbjct 8893 GGAATCAGCACGAAGTCGGCCGCCTTGATGGCCGACACGGCCAGGTCGGCCGCCTGGGGC 8952
Query 25461 GCGCCATCAATGACAACCCAATC 25483
|| || || || || || ||||
Sbjct 8953 GCTCCGTCGATCACGACGAAATC 8975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 122080563332134
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |