Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq6120 109 5e-19 >seq6120 Length=7451 Score = 109 bits (120), Expect = 5e-19 Identities = 303/458 (66%), Gaps = 10/458 (2%) Strand=Plus/Minus Query 20134 CGGAAAGGGACGTGGAGTG-CGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGT 20192 ||| || || ||||| ||| |||| || ||| | | ||| ||||| || | ||| Sbjct 5065 CGGGAATGGTCGTGG-GTGACGCGCCAACTGTTCCTTCAATGGTTCTATGTGGTTACTGT 5007 Query 20193 AGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAG 20252 ||| || ||||| || | |||||||| || || || ||| |||| || || ||||||| Sbjct 5006 AGACATGAGCATCGCCAAGCGTGTGAACGAAGTCTCCCGGTTTAAGGCCCGTCACATGAG 4947 Query 20253 CAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGT 20312 | | ||| || || | || | ||| ||| |||||||| || || |||| |||||| | Sbjct 4946 CTATCATGTACGTAAGCAGTGCATACGAGGCGATGTTAAAGGGCACACCCAGACCCATAT 4887 Query 20313 CTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACC----GTC--AGCTACATAAAATT 20366 || | | ||||||||||| || || | |||||| ||| | ||| || |||| Sbjct 4886 CTGCGCTGCGTTGATACAGCTGGCAAGACAACTCACCGCGTGTCGTTGATACGTAGAATT 4827 Query 20367 GA-CATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCA 20425 || || |||| || || || || | |||||| || | ||| |||||||| || Sbjct 4826 GAGCAAGACAA-TGGCATGGTGGCAATGCCATCTGCGGTATATCCAAAGGGTTCCAAGCG 4768 Query 20426 CACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAAT 20485 ||||||| || | | ||| ||||| | ||| || | | | | |||| Sbjct 4767 GACATAATAATCCGACGATCCGTTGGATTTGTGCGTATGGTTTCAATCACTTGCTTCAAT 4708 Query 20486 TGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGC 20545 ||||||| || || || ||||| ||| | || | | || || |||||||| Sbjct 4707 TGGTCAACACCTTGTCCGGTATAATCATCGTCGCAGGTCTTATATTTGGCGCCAAAGTGA 4648 Query 20546 CTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTC 20583 | ||| || ||||| || || || || | ||| |||| Sbjct 4647 CGCCATTGAAAACCATATACCGGACCAAGATCGGCCTC 4610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441265364343320