Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq12641 122 4e-23 >seq12641 Length=70532 Score = 122 bits (134), Expect = 4e-23 Identities = 266/391 (68%), Gaps = 8/391 (2%) Strand=Plus/Minus Query 60080 GTCATAAGGAGAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCGGAACGTGACATC 60139 ||||||||| ||||| | |||| ||| | | ||| || | || |||| ||| Sbjct 59839 GTCATAAGGCGAGAACAAATACATATCTTCGTTATTCTTCGCCAACTCAAAAGTGATATC 59780 Query 60140 AGGAACGATAACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTCACG 60199 ||| || | || ||| | || || || ||||||||||| ||||| || || || || || Sbjct 59779 AGGTACTACAATTCCCAAAGACAGGGTTTTAATACGGATTTTCTCATCCGCATTCTCGCG 59720 Query 60200 CTTGGTATCCAGGAA-CGCAAGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCCTG 60258 ||| ||||||| || ||||| || || || || || ||||| | ||||| || || | Sbjct 59719 CTTTGTATCCAAAAATCGCAA-GACATCAGGATGATGCGCGTTAAGGTATACTGCGCCCG 59661 Query 60259 CGCCCTGCCTTGCACCCAGTTGGTTAG-AGTAGGAGAAGCTATCTTCTAGAATCTTCATC 60317 | ||||| || || || |||||||| | | | | |||| ||| || || | |||||| Sbjct 59660 CTCCCTGTCTAGCGCCAAGTTGGTTTGCATAACTAAAAGC-ATCCTCAAGCAACTTCATA 59602 Query 60318 ACAGGGATGACTCCAGAGGCCTGACCTTCTCGA--CCCTTAATCGGAGCTCCTGCCTCGC 60375 | || || || ||||| | ||| ||||| | |||||| ||||| || ||| | Sbjct 59601 ATGGGAATCACGCCAGAAGATTGA--TTCTCAATTTGCTTAATTGGAGCACCCATCTCAC 59544 Query 60376 GGAGGTTGGAGAATCCAATGCCGACTCCGCCACCACGCTTAGACAGCTGGAGAGAGTCCT 60435 | | ||| | | | || | | || || ||||| || ||||| ||||| | | | | Sbjct 59543 GAATGTTAGTCAGTAAAAAGGCTACGCCACCACCGCGTTTAGAAAGCTGTAAGGCGGAGT 59484 Query 60436 GAACGATTCGACCGATGGACCCCATGGTGTC 60466 || | | || || |||||| |||| |||| Sbjct 59483 TAATGCTGCGTCCTATGGACTCCATATTGTC 59453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 225674428608620