Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_009816.1
Length=70579
Score E
Sequences producing significant alignments: (Bits) Value
seq12641 122 4e-23
>seq12641
Length=70532
Score = 122 bits (134), Expect = 4e-23
Identities = 266/391 (68%), Gaps = 8/391 (2%)
Strand=Plus/Minus
Query 60080 GTCATAAGGAGAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCGGAACGTGACATC 60139
||||||||| ||||| | |||| ||| | | ||| || | || |||| |||
Sbjct 59839 GTCATAAGGCGAGAACAAATACATATCTTCGTTATTCTTCGCCAACTCAAAAGTGATATC 59780
Query 60140 AGGAACGATAACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTCACG 60199
||| || | || ||| | || || || ||||||||||| ||||| || || || || ||
Sbjct 59779 AGGTACTACAATTCCCAAAGACAGGGTTTTAATACGGATTTTCTCATCCGCATTCTCGCG 59720
Query 60200 CTTGGTATCCAGGAA-CGCAAGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCCTG 60258
||| ||||||| || ||||| || || || || || ||||| | ||||| || || |
Sbjct 59719 CTTTGTATCCAAAAATCGCAA-GACATCAGGATGATGCGCGTTAAGGTATACTGCGCCCG 59661
Query 60259 CGCCCTGCCTTGCACCCAGTTGGTTAG-AGTAGGAGAAGCTATCTTCTAGAATCTTCATC 60317
| ||||| || || || |||||||| | | | | |||| ||| || || | ||||||
Sbjct 59660 CTCCCTGTCTAGCGCCAAGTTGGTTTGCATAACTAAAAGC-ATCCTCAAGCAACTTCATA 59602
Query 60318 ACAGGGATGACTCCAGAGGCCTGACCTTCTCGA--CCCTTAATCGGAGCTCCTGCCTCGC 60375
| || || || ||||| | ||| ||||| | |||||| ||||| || ||| |
Sbjct 59601 ATGGGAATCACGCCAGAAGATTGA--TTCTCAATTTGCTTAATTGGAGCACCCATCTCAC 59544
Query 60376 GGAGGTTGGAGAATCCAATGCCGACTCCGCCACCACGCTTAGACAGCTGGAGAGAGTCCT 60435
| | ||| | | | || | | || || ||||| || ||||| ||||| | | | |
Sbjct 59543 GAATGTTAGTCAGTAAAAAGGCTACGCCACCACCGCGTTTAGAAAGCTGTAAGGCGGAGT 59484
Query 60436 GAACGATTCGACCGATGGACCCCATGGTGTC 60466
|| | | || || |||||| |||| ||||
Sbjct 59483 TAATGCTGCGTCCTATGGACTCCATATTGTC 59453
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 225674428608620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |