Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq10147 91.5 2e-13 >seq10147 Length=26039 Score = 91.5 bits (100), Expect = 2e-13 Identities = 244/363 (67%), Gaps = 10/363 (3%) Strand=Plus/Minus Query 171726 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 171785 |||| |||||||||||||| | |||||||| | ||||| || | |||| ||||| Sbjct 13261 AACCAGTGCCAATACCTTCTGCACCGTTCACCAACACCATCGGTATAATTGGTATATACC 13202 Query 171786 AGTCTGGTTCAATCGCAC-GCCCATCATCATCCAAATAGTTGAGCACGGGGTCGTCCCTC 171844 | | ||| ||||| || | | ||||| ||| || || |||| || || ||| | Sbjct 13201 AATTTGGCTCAAT-GCGCTGGCCATCGTCAACCTGGTATGACAGCAAAGGATCATCCAAC 13143 Query 171845 GGATCAAAGATTTTACGAGCATCCTTGGTGAGTTTT--GTGAAGATGTACCTCGTTTGAG 171902 || | ||| || ||| | | | || || | ||||| || || | | | Sbjct 13142 GGGTGAAAAATAAGACGTGTAAGC--GGCGACATCAAAGTGAAAATATAACGAGCACTGG 13085 Query 171903 ACGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTG 171961 |||| ||||| || || | || || || ||||| ||||| | ||| ||||| | ||| Sbjct 13084 -CGCAATCTTTACCGCCAACAAGTCGGGTACCAAACTGACCGCGCGGCTCAAGCAAATTA 13026 Query 171962 ATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGAC 172020 || || || ||||| | ||| | ||||| || ||||| || || | ||| ||||| Sbjct 13025 ATGTTATTCGAACCGACAAAGTTTTGTGCCAAATTAACAATAGTCATTTG-GAGTGAGAC 12967 Query 172021 TTCACCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTCAT 172080 |||||||||||| || || ||| | || || || | | | ||| |||||||| || | Sbjct 12966 TTCACCGTGATGATATGCTGACATCTCTGCCACTGAACCGGACAATTGTGCCACTTTGAC 12907 Query 172081 CTC 172083 ||| Sbjct 12906 CTC 12904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597208196666840