Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_010342.1 Length=39245 Score E Sequences producing significant alignments: (Bits) Value seq17700 82.4 2e-11 >seq17700 Length=9767 Score = 82.4 bits (90), Expect = 2e-11 Identities = 97/128 (76%), Gaps = 4/128 (3%) Strand=Plus/Plus Query 26357 GCTGCCCTGCGGGTCTAAGTCGACAAGTACCACCTTGTGGCCGGAT-GCGT-GCAGCCAG 26414 ||||||||| ||||| | |||||||| | ||| | ||| || | || |||| | Sbjct 9078 GCTGCCCTGGGGGTCGGAATCGACAAGCAACACGTCCGCGCC--ATCGAGTTGCAGGGCG 9135 Query 26415 CACGCTAGGTTAGTGGCTACGGTGGTCTTTCCTGCCCCGCCCTTCTGATTCAGTACTGCA 26474 | ||||||| ||||| | |||||||||||||| ||||||||||| ||||| || ||| Sbjct 9136 CGGGCTAGGTGCGTGGCGATGGTGGTCTTTCCTGAACCGCCCTTCTGGTTCAGCACGGCA 9195 Query 26475 ATCACTTT 26482 || ||||| Sbjct 9196 ATGACTTT 9203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125433387839382