Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_011273.1
Length=164602
Score E
Sequences producing significant alignments: (Bits) Value
seq12641 114 1e-20
>seq12641
Length=70532
Score = 114 bits (126), Expect = 1e-20
Identities = 601/943 (64%), Gaps = 16/943 (2%)
Strand=Plus/Plus
Query 155935 GCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGACC 155994
|| || |||||||| ||| | ||||| || ||| || || ||||| || | ||
Sbjct 61600 GCGATTAACTGGAATCGCATTGAAGACGAAAAAGACTTAGAAGTCTGGAATCGTTTAACG 61659
Query 155995 AACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGG-CACCA 156053
|| || |||||||||||||| | || | || ||||| | | || ||| || |
Sbjct 61660 TCAAATTTTTGGCTGCCGGAGAAAGTGCCACTTTCAAATGATATTCCATCTTGGGCAAC- 61718
Query 156054 GCTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGGA 156113
||| || | | |||||| | | ||||| || ||||| || || ||||| | || ||
Sbjct 61719 GCTAACGGCGCAAGAGCAAGAGCTGACCATTCGTGTGTTTACAGGTTTGACGCTACTTGA 61778
Query 156114 CACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACGA 156173
|| | ||| || || || | | | || || || || | || || |||||
Sbjct 61779 TACGGTACAGAATGTGGTAGGTGCTTTGTGTTTGATTCCAGATGCTGTGACGCCACACGA 61838
Query 156174 GGAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCG-TGCACGCACGCAGCTACTCGA 156232
||| |||| || ||||| ||| | || ||||| |||| | ||||| || |||
Sbjct 61839 AGAGTCGGTTTATACCAATATCTCTTTTATGGA-AGCGGTACACGCGAAAAGTTACAGTT 61897
Query 156233 ACATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGGAGG 156292
|| || || || || || | ||||| | || | || || |||||| |
Sbjct 61898 CAATTTTTTCTACTCTATGTCAGATGAAGGATGTGGATGAAGCATTTCGCTGGAGCATAG 61957
Query 156293 AGAACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTGACGACC 156352
| |||| |||||| || ||||| |||| || | | | || || || ||||
Sbjct 61958 AAAACGAATTCCTGCAAAACAAGGCAAAGATTGTATTGGGGCATTATCGTGGGGATGACC 62017
Query 156353 CGCTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGCGGCTTCT 156412
| | | ||| ||||| ||| | | | ||| || | ||||| ||||| |
Sbjct 62018 CTTTAATGCGTAAGGTTGCCAGCGTTTTCTTAGAGTCATTTTTATTCTATTCTGGCTTTT 62077
Query 156413 ACCTGCCGATGTTCTGGTCGTCG-CGAGGCAAGCTCACCAACACCGCCGACATGATCCGG 156471
| |||| |||| |||| || | |||| || | || || || || ||| | ||| |
Sbjct 62078 ATTTGCCAATGTACTGGA-GTAGTCGAGCAAAATTGACTAATACGGCGGACTTAATCAGA 62136
Query 156472 CTCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGAAGGGC 156531
| || || || || || || |||||||| || ||||| || || || || ||| | | |
Sbjct 62137 TTGATTATTCGTGATGAAGCGGTGCACGGTTATTACATTGGTTATAAATTTCAGCAAG-C 62195
Query 156532 CTGGAGAAGGAGACCAAGGCCCGCCAGCAGGAAC---TCAAGGACTACACCTATGAGCTG 156588
|| | || | ||| | | | || || ||| | || ||||| | ||||| ||
Sbjct 62196 CT--ACAATAAAGCCACGCCTAGTCACCAAGAAGAGGTGAAAAACTACGCTTATGAATTG 62253
Query 156589 CTGTTCGAGCTGTTCGACAACGAGCAGGAGTACACCCAGGACCTCTACGACGCCACCGGC 156648
|| || ||| || ||||| ||||||| |||| | |||||||| |||
Sbjct 62254 CTTCATGATTTGTATGATAACGAAGTCAAGTACACGGAGGATTTATACGACGCTGTTGGC 62313
Query 156649 CAGACCGAGGACGTGAAGAAGTTCCTGCGGTACAACGGCAACAAGGCCCTGCAGAACCTG 156708
|||||| || || ||||||||| ||| ||||||| ||||||||| | ||| ||
Sbjct 62314 TGGACCGAAGATGTAAAGAAGTTCTTGCACTACAACGCCAACAAGGCTTTAATGAATTTG 62373
Query 156709 GGCTACGACGCGCTGTTCAGCCGCAGCGACTGCG-ACGTCAACCCGGCCATCCTGAGCG- 156766
|| | || || || || || | ||| || | || || ||||| ||| | ||||
Sbjct 62374 GGTTTTGAAGCACTCTTTCCTAGCT-CTACTACGGATGTGAATCCGGCAATCTT-AGCGG 62431
Query 156767 CGCTGTCGCCCGGTGGAGACGAGAACCACGACTTCTTCTCGGGGTCGGGCAGCACGTACG 156826
| || ||||| | | || || || || || ||||||||||| || ||| | || |
Sbjct 62432 CCCTATCGCCAAGCGCGGATGAAAATCATGATTTCTTCTCGGGTTCTGGCTCGTCATATG 62491
Query 156827 TCATGGCCAAGGGTGTGGTCACCGAAGACGACGACTGGGACTT 156869
|||| | || | || | || | ||| || |||||||||||
Sbjct 62492 TCATTGGTAAAGCTGAAGCTACAGCAGATGAGGACTGGGACTT 62534
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 526470219366960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |