Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq8544 86.0 5e-12 >seq8544 Length=16314 Score = 86.0 bits (94), Expect = 5e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 |||| || |||||||| |||||||| ||||| ||||||||||||| ||||||||| ||| Sbjct 10156 TGGCACTAGGCGAGGGCTGGCACAATTACCATCACGTGTTCCCCTGGGACTACAAGACCG 10215 Query 108941 CCGAGTTGGGGAACGAC 108957 |||||| || ||| || Sbjct 10216 GCGAGTTCGGCAACTAC 10232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381682194935112