Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq17788 114 1e-20
>seq17788
Length=7208
Score = 114 bits (126), Expect = 1e-20
Identities = 166/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|||||||| || | ||||| |||||||| | || || ||||| || ||||| |||||
Sbjct 2427 GCTCCACCACGAAGGCGCAAAACCAAATGCAAAGTCGATTCTTTCTGGATATTATAATCA 2368
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| || ||| ||| || | |||||| ||||| |||| | || || ||||| |||
Sbjct 2367 GAGAGTGTTCGACCATCTTCCAACTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGA 2308
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTT-GAGTTGTTCGACGGTGTCCGTACTCTC 127062
|| || || || |||||| ||| | | |||| || | ||||| ||||||| | ||
Sbjct 2307 GGAATTCCTTCTTTGTCC-TGAATCTTGGCTTTGACATTTTCGATAGTGTCCGAAGGTTC 2249
Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
||| || | || | || || || || || ||||| |||||||||||||||
Sbjct 2248 GACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACAAAAATCTGCATG 2197
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475385057161520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |