Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq17788 118 1e-21 >seq17788 Length=7208 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCT 45172 ||| || || || | ||| || | ||||| || ||||| || |||||||||||||| Sbjct 2425 TCCACCACGAAGGCGCAAAACCAAATGCAAAGTCGATTCTTTCTGGATATTATAATCAGA 2366 Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232 || ||| | ||| ||||| ||||| || || | || | ||||| || || || || Sbjct 2365 GAGTGTTCGACCATCTTCCAACTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGAGG 2306 Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGAC 45292 ||| |||||||| || ||||| || ||||| ||| | ||||| |||| ||||| Sbjct 2305 AATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGAAGGTTCGAC 2246 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| | || || || || || ||||| |||||||| ||||| Sbjct 2245 CTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACAAAAATCTGCAT 2198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451893176771080