Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq4404 86.0 1e-11 >seq4404 Length=3800 Score = 86.0 bits (94), Expect = 1e-11 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 160217 TACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCC 160276 |||||||| | |||||||||||| ||||| || || ||| ||||| | ||||| Sbjct 2375 TACATTTCGGAGTGCACATTTTCCATGGCAATTTGGAAGCCATAGAAGCAACGTGCCTC- 2317 Query 160277 AGATACT-GCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGC 160335 || ||| | || || || |||| | | ||| ||| |||| || | || |||| Sbjct 2316 AGTCACTTGAACTTCTTGGCTGAAACGCTCGACCAAATTTTCATTCACAATGCCATCGGA 2257 Query 160336 GGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGT 160379 || |||||||||||||||||||| || |||||||| | ||||| Sbjct 2256 AGCAGCAAAGAAAGCCAACACGTGCGATATGAAATGACGCTCGT 2213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794961649284880