Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq489 136 9e-27
seq17788 118 2e-21
>seq489
Length=77466
Score = 136 bits (150), Expect = 9e-27
Identities = 156/209 (75%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
|| || |||||||||||||| | ||||||||| | | || | |||||||||||| |||
Sbjct 4418 TGCAGGGTCGACTCCTTTTGAATGTTGTAGTCGGAAAGTGTGCGTCCATCTTCCAGTTGC 4477
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
|| ||||| ||||| |||||||| ||||| || ||| || ||| ||||| |||||
Sbjct 4478 TTGCCGGCAAAGATCAGACGCTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTA 4537
Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606
||| || |||| |||||| | | || || ||||| || || |||||||| |||
Sbjct 4538 GCCTTGACATTCTCGATGGTGTCAGAAGGCTCAACCTCCAAGGTAATGGTCTTACCGGTG 4597
Query 199607 AGAGTTTTCACAAAAATTTGGTACATTTT 199635
|||||||| || || || || ||||||
Sbjct 4598 AGAGTTTTGACGAATATCTG---CATTTT 4623
>seq17788
Length=7208
Score = 118 bits (130), Expect = 2e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | || | |||||| || || |||| || || |||| | ||
Sbjct 2418 CGAAGGCGCAAAACCAAATGCAAAGTCGATTCTTTCTGGATATTATAATCAGAGAGTGTT 2359
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||||| ||| || || || ||||| ||||| || || || ||| |||||||
Sbjct 2358 CGACCATCTTCCAACTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGAGGAATTCCT 2299
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
||| ||||||||||| || || ||||| ||||| | | ||| || || |
Sbjct 2298 TCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGAAGGTTCGACCTCAAGA 2239
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| |||||||||||||| ||||| |||||||| ||
Sbjct 2238 GTGATGGTCTTACCCGTGAGGGTTTTAACAAAAATCTG 2201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178627461639691
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |