Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq17788 93.3 3e-14
>seq17788
Length=7208
Score = 93.3 bits (102), Expect = 3e-14
Identities = 155/222 (70%), Gaps = 4/222 (2%)
Strand=Plus/Minus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564
|||| |||||||||||||| |||||| || ||||||||||| | | || ||
Sbjct 2412 CGCAAAACCAAATGCAAAGTCGATTCTTTCTGGATATTATAATCAGAGAGTGTTCGACCA 2353
Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624
|| ||||| ||||| || |||| |||| ||| || ||||| | || | |||||||||
Sbjct 2352 TCTTCCAACTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGAGGAATTCCTTCTTTG 2293
Query 39625 TC--GCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAA 39682
|| | || || | | || ||| || ||||| | ||| || || | ||| |
Sbjct 2292 TCCTGAATCTTGGCTTTGACATTTTCGATA--GTGTCCGAAGGTTCGACCTCAAGAGTGA 2235
Query 39683 TTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATGTCGT 39724
| || |||||||| | ||||| || || |||||||||| ||
Sbjct 2234 TGGTCTTACCCGTGAGGGTTTTAACAAAAATCTGCATGTTGT 2193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347287159749809
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |