Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq18134 158 5e-33
seq5037 154 6e-32
seq1169 136 2e-26
seq1648 129 2e-24
seq17788 122 3e-22
seq1697 114 5e-20
seq8176 107 8e-18
seq4416 84.2 9e-11
>seq18134
Length=7618
Score = 158 bits (174), Expect = 5e-33
Identities = 253/363 (70%), Gaps = 3/363 (1%)
Strand=Plus/Minus
Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303
||||| |||||||||||||||||| | |||| ||||| || || || ||| || |
Sbjct 4919 CCTGAGGAAATTTCATCTATGGTTTTGTCTAAGATGAAGGAGACCGCCGAAGCCTACTTG 4860
Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363
|| | || || |||| || || ||||| |||||||| ||||| ||| | |||||
Sbjct 4859 GGCAAGACCGTGACAAATGCTGTCATCACTGTGCCCGCTTACTTCAACGATTCGCAACGT 4800
Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423
||||| ||||| ||||| || ||||||||||||||||||||| || ||||| || |||
Sbjct 4799 CAAGCGACTAAGGATGCTGGTACTATTGCTGGTTTAAATGTTCTCCGTATTATCAACGAA 4740
Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaT 451483
|| || || || ||| | || ||||| || | || || | | | ||| |||
Sbjct 4739 CCCACTGCCGCCGCTATTGCCTATGGTCTTGACAA---GAAGGCCGCTGGTGAACGTAAT 4683
Query 451484 ATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGAT 451543
|| | | || ||||| || || || ||| ||| || | || || ||||| ||
Sbjct 4682 GTTCTCATTTTCGATTTGGGCGGTGGTACTTTCGATGTGTCAATTCTGTCGATTGATGAC 4623
Query 451544 GGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603
|| | || || || ||| | || |||||| || ||| | || ||||||||| | ||
Sbjct 4622 GGCATCTTCGAGGTCAAGTCCACGGCTGGTGACACCCATTTGGGTGGTGAAGATTTCGAC 4563
Query 451604 AAT 451606
|||
Sbjct 4562 AAT 4560
>seq5037
Length=32345
Score = 154 bits (170), Expect = 6e-32
Identities = 366/544 (67%), Gaps = 18/544 (3%)
Strand=Plus/Plus
Query 451065 AATCAATGGTAAATTCAAATGCCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCC 451124
||||||| | || ||||| || | |||||||||| ||||| |||||||| |||||||
Sbjct 19635 AATCAATTGACAA--CAAATCCCGAGAACACAGTATTCGATGCAAAACGTTTGATTGGCC 19692
Query 451125 GTATGTATGATGATGATAC---TGTACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAG 451181
|| | ||| | |||||| ||| ||| | || | |||||||| | | | || |
Sbjct 19693 GT--GAATGGTC-TGATACGAATGTCCAACATGACATCAAATTCTTCCCATTCAAGGTGG 19749
Query 451182 TAAATCAAAAAGGAAAGCCCTATATTCAAGT--AAATTATAAAGGTGAAACTAAAACTTT 451239
| | | || |||||| | || || ||| | ||| || ||| ||
Sbjct 19750 TCGAAAAGAACTCAAAGCCACACATCAGCGTTGAAACGTCACAGGGTAA--TAAGGTATT 19807
Query 451240 TGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATA 451299
|| || |||||||| ||| ||||||| | ||| ||||| ||||| || ||| |||
Sbjct 19808 CGCACCGGAAGAAATCTCAGCTATGGTATTGCTTAAGATGAAGGAAACCGCTGAAGCATA 19867
Query 451300 TATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACA 451359
| |||| || || | || || |||| || |||||||| || |||||||||||
Sbjct 19868 TCTTGGCAAGAAGGTGACACACGCTGTCGTTACGGTGCCCGCTTACTTTAATGATGCACA 19927
Query 451360 ACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAA 451419
||| || || || || ||||| || ||||| ||| || | ||| | || || |||||
Sbjct 19928 ACGTCAGGCGACAAAGGATGCTGGTGTCATTGCCGGTCTACAGGTTATGCGCATCATTAA 19987
Query 451420 TGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaa 451479
||| || || || |||||| | || ||||| | ||| || || || | || ||
Sbjct 19988 TGAGCCGACCGCTGCTGCTATTGCCTATGG-TTTGGACAA--GAAGGA---GGGCGAGAA 20041
Query 451480 aaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGA 451539
|| |||| || || ||||| || || || ||| |||| || | | | |||||
Sbjct 20042 GAACGTTTTGGTCTTCGATTTGGGCGGTGGTACTTTTGATGTCTCATTGTTGACCATTGA 20101
Query 451540 AGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATAT 451599
|||| ||||| ||||| || ||||| |||||||| ||| | || ||||||||| |
Sbjct 20102 TAATGGTGTATTCGAAGTGGTTGCCACCAACGGTGATACACATTTGGGTGGTGAAGATTT 20161
Query 451600 TGAT 451603
|||
Sbjct 20162 CGAT 20165
>seq1169
Length=8375
Score = 136 bits (150), Expect = 2e-26
Identities = 324/483 (67%), Gaps = 15/483 (3%)
Strand=Plus/Minus
Query 502357 AAAAATATGGAACTAGAAACAGTTTGCTTACAGCACTAATGCCAACAGCATCTACATCTC 502416
|||| |||||| ||||| | ||| ||||| |||||| ||||| |||||| |||
Sbjct 1317 AAAAGTATGGAGTAAGAAATTCCCTCCTTGTAGCACCAATGCCTACAGCTTCTACAGCTC 1258
Query 502417 AACTATTAGGCAATTATGAATCATTTGAACCATTTACTTCTAATATATATACTAGAAGAA 502476
|| | | || ||| |||||||||||||||| | ||||| |||||||| || |||||
Sbjct 1257 AAATCATGGGAAATAATGAATCATTTGAACCCTACACTTCAAATATATACACCAGAAGGG 1198
Query 502477 CTTTAGCAGGTGAATTTATAGTTGTTAATAAACATTTAATAAATGATTTGAATGAAATCG 502536
|||| | || || ||| ||||||||| | ||||| || |||||| | |||| | |
Sbjct 1197 TTTTATCTGGAGAGTTTCAAGTTGTTAACCATTATTTATTACGTGATTTAACTGAATTGG 1138
Query 502537 GTGAATGGACTAATGAAATTAGACAAAAAGTAATTAATGATAA----TGGTTCTATTCAA 502592
| ||| | |||| || || ||| | || || || || |||||||||||||
Sbjct 1137 ATTTGTGGGATGATGATAT--GAAAAATAATA--TAGTGTCAAGTCGTGGTTCTATTCAA 1082
Query 502593 AATAT---ATTACTACCTAATATAATTAAAAACATCTATCAAACTTCATATGAAATGAAA 502649
|||| | | | ||||| | | | || | ||| ||||| | || ||
Sbjct 1081 CATATTGAAACAATTCCTAAAGATGTCAGAGACTTATATAAAACTGTCTGGGAGATTTCT 1022
Query 502650 CAAAAATATATAAT--AGATGGATGTTCTATACGGGGAGCTTATATAGATCAAACCCAAT 502707
||||| | ||| | |||| || ||| | ||||||| || || |||| ||| |
Sbjct 1021 GTAAAATCAACAATAAAAATGGCTG-CAGATA-GAGGAGCTTTCATTGACCAAAGCCAGT 964
Query 502708 CTATGAATCTTTATTTTGCACAACCAGACTCTCAAAAATTAACTTCCTCTCAATTTTATG 502767
| | ||| | || | || ||||| | | | ||||| ||||| || ||||||
Sbjct 963 CATTCAATATACATGTCGCCGAACCAAATTATGGTAAATTGACTTCAATACACTTTTATT 904
Query 502768 CATGGGAACAAGGATTAAAAACAGGGTTATATTATTTACGTAGCAAACCATCAGCAAATG 502827
||||| || ||| | ||||| || | ||||||||||| | || || |||||||||
Sbjct 903 CATGGAAAGCAGGTCTTAAAACTGGAATGTATTATTTACGCACAAAGCCGGCAGCAAATG 844
Query 502828 CTA 502830
|||
Sbjct 843 CTA 841
Score = 96.9 bits (106), Expect = 1e-14
Identities = 300/465 (65%), Gaps = 8/465 (2%)
Strand=Plus/Minus
Query 501060 TTTGCTTTCTATTTAGAACCTCATCATGCGGATATATTTGATTTTTTGGAACTACGAAAA 501119
|||||| | |||||||| ||| ||||| || || || || || ||||| ||| ||||
Sbjct 2194 TTTGCTATTTATTTAGAGCCTTGGCATGCAGACATTTTCGAGTTCTTGGATCTAAAAAAA 2135
Query 501120 AATACTGGTGCCGAATCAGAAAGAGCCCGTGATTTATTTTTAGCATTATGGGTTTCTGAC 501179
|||||||| ||| | | ||||| ||||||||||||| || | ||| || | |||
Sbjct 2134 AATACTGGAAAGGAAGAACACAGAGCTCGTGATTTATTTTACGCTCTTTGGATTCCAGAC 2075
Query 501180 TTATTTATGAATCAGGTTAAATTAAATAATGATTGGT-ATTTATTTTGTCCAGACAAAGC 501238
| |||||||| | || | | || || |||| | ||| | ||||| | |||
Sbjct 2074 CTTTTTATGAAACGAGTAGAGGAAGATCGAGAGTGGTCACTTA-TGTGTCCTCATAAATG 2016
Query 501239 ACCAGGATTAAATGATGTATATGGAGATGAATATGAAACTCTTTATTGGAAATATGTATC 501298
|| || | ||||||| | || || || | ||||| | ||| ||||||| |
Sbjct 2015 CCCTGGCCTTCATGATGTTTGGGGTGACGAGTTTGAAAAGTTATATGAAAAATATGAACA 1956
Query 501299 AGAAGAAAAATNNNNNNNNNNNNNNAAAGCCCGGAAAT---TATGGGAAGCTATAATGAC 501355
||||| ||||| | ||| | ||| |||||||
Sbjct 1955 AGAAGGTCGCGCAAGTAGAAAAATTAAAGCAC---AATCTCTTTGGTTTTCTATAATTGA 1899
Query 501356 AGCACAGTTTGAAACTGGTTCACCCtatatgttatataaagataatattaataaaaaatc 501415
||| || | |||||||| | || |||||||| | ||||||| ||||| ||||
Sbjct 1898 AGCTCAAGTAGAAACTGGCACTCCATATATGTTGTTTAAAGATTCATGTAATAGAAAAAG 1839
Query 501416 aaaccagaaaaatataggaataatTAGAAGTTCAAATTTATGTGCTGAAATTGTAGAATA 501475
||||| ||||| | || | |||| | | |||||||| | ||||||||||||||
Sbjct 1838 CAACCAACAAAATGTTGGCACCATTAAATGCAGTAATTTATGCACAGAAATTGTAGAATA 1779
Query 501476 TTCAGATTCTACTGAAACAGCTGCTTGTAATTTAGCTTCAATTGC 501520
||| | | ||||| || | || ||||| || || |||||
Sbjct 1778 TTCTGCACCAGATGAAATTGCGGTATGCAATTTGGCATCGATTGC 1734
>seq1648
Length=58106
Score = 129 bits (142), Expect = 2e-24
Identities = 134/176 (76%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333
|||||||| || ||||| ||| ||| | | | ||||||| | ||||| ||||
Sbjct 33421 AAAATGAAGGAGACAGCCGAAGCTTATTTGAATACACCAGTTAAGAACGCAGTCGTTACA 33362
Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393
||||| ||||||||||| || ||||||| || || ||||||||||| || || || |||
Sbjct 33361 GTTCCAGCTTATTTCAACGACTCACAACGTCAGGCTACTAAAGATGCTGGTCAGATAGCT 33302
Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449
||| | ||||||||||| | || ||||| || || || ||||| || ||||||||
Sbjct 33301 GGTCTTAATGTTCTTCGCGTCATCAATGAGCCAACCGCTGCTGCCCTTGCATATGG 33246
>seq17788
Length=7208
Score = 122 bits (134), Expect = 3e-22
Identities = 136/182 (75%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| |||||||| || || ||||| || || |||||||| || ||| | ||
Sbjct 2198 ATGCAGATTTTTGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCTTCG 2257
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | || ||| | | ||| || ||||| || || |||||||||||||| ||||||
Sbjct 2258 GACACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAA 2317
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||| |||| || | || ||||| | |||||||| |||| | | |||||||||
Sbjct 2318 CAACGTCTAATCTTTGCTGGCAAACAGTTGGAAGATGGTCGAACACTCTCTGATTATAAT 2377
Query 391230 AT 391231
||
Sbjct 2378 AT 2379
>seq1697
Length=24975
Score = 114 bits (126), Expect = 5e-20
Identities = 182/256 (71%), Gaps = 10/256 (4%)
Strand=Plus/Minus
Query 451356 CACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTA 451415
|||| || || || || |||||||| ||| ||||||||| | ||||| | ||||| |
Sbjct 13490 CACAGCGCCAGGCCACCAAAGATGCTGGATCAATTGCTGGTCTCAATGTGTTGCGAATAA 13431
Query 451416 TTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAG 451475
| ||||| || ||||||||||| || || ||||| || ||| || ||| | || |
Sbjct 13430 TAAATGAGCCAACAGCAGCTGCGCTTGCCTATGGTCT-GGATAA--AAATCTTAAAGGCG 13374
Query 451476 aaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTT--C 451533
|||| ||| | || | |||||| ||||||| || || |||| ||| | ||| |
Sbjct 13373 AAAAGAATGTCTTGATCTTTGATCTTGGTGGCGGCACATTTGAT--GTCTCCATTTTGAC 13316
Query 451534 AAT---TGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGG 451590
||| ||||| | |||||||||| || | || ||| ||||| ||| | || ||
Sbjct 13315 AATCGATGAAGGTTCACTATTTGAAGTTAAATCCACGGCTGGCGATACGCATTTGGGCGG 13256
Query 451591 TGAAGATATTGATAAT 451606
||||||| ||||||||
Sbjct 13255 TGAAGATTTTGATAAT 13240
>seq8176
Length=26989
Score = 107 bits (118), Expect = 8e-18
Identities = 130/177 (73%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333
|| |||||| |||| |||||| | | | | || | || ||||| ||||| ||||||
Sbjct 15125 AAGATGAAAAAAACGGCAGAAGATTTTCTGGGAGAAACCGTAACTGAAGCAGTGATTACT 15184
Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393
|| || || || || ||||| |||||||| |||||||||||||| ||||| | |||||||
Sbjct 15185 GTACCAGCATACTTTAATGACGCACAACGCCAAGCAACTAAAGACGCAGGGCGTATTGCT 15244
Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450
|| | | || || ||||| ||||| || || || || ||| | || | ||||
Sbjct 15245 GGGCTGGAAGTCAAGCGCATTATCAATGAGCCAACCGCTGCGGCTTTGGCGTTTGGA 15301
>seq4416
Length=2693
Score = 84.2 bits (92), Expect = 9e-11
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 451217 TATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAA 451276
|||||||| |||| |||| ||| ||| || ||| | || || ||||| || || ||
Sbjct 1186 TATAAAGGCGAAAAGAAAAGTTTCTTTCCGGAGGAAGTATCCTCAATGGTGCTGACGAAG 1127
Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336
||| ||||| || || || | ||| | | || || ||||| || | || ||
Sbjct 1126 ATGCGTGAAACCGCTGAGGCTTACTTGGGTAATACGGTGACGGATGCCGTGGTCACAGTG 1067
Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGC 451380
||||| |||||||||||| |||||||||| || || ||||| ||
Sbjct 1066 CCCGCCTATTTCAATGATTCACAACGGCAGGCTACAAAAGACGC 1023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975225462581084
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