Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq11998 86.0 7e-12
>seq11998
Length=46925
Score = 86.0 bits (94), Expect = 7e-12
Identities = 189/284 (67%), Gaps = 12/284 (4%)
Strand=Plus/Minus
Query 9279 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 9338
|||||||||||||| || || | |||||| | ||||| || || || ||||| |
Sbjct 37352 TCAAAACCATCCATTTCCACTAACATTTGGTTCAATGTTTGCTCACGCTCGTCATTACC- 37294
Query 9339 GGCATACCACCA------GCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAG 9392
||||||| |||| ||||| || ||||| |||||||||||||| ||
Sbjct 37293 -----ACCACCATGTCCTGCACCACGTTGGCGCCCTACGGCGTCAATCTCATCAATAAAA 37239
Query 9393 ACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCC 9452
| ||| || || ||||| ||| | ||||| | || || || | | || ||
Sbjct 37238 ATAATGCAGGGAGCATTTTTTTTAGCGTTCTCAAACATGTCACGTACACGTGCCGCTCCA 37179
Query 9453 ACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGAT 9512
|| ||||||||||| |||||||||| | | | ||| || || || || || | |
Sbjct 37178 ACGCCAACAAACATTTCCACAAAGTCAGAGCCAGAAATACTGAAAAACGGAACCTTTGCT 37119
Query 9513 TCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTgg 9556
||||| ||||||| | || | || || || || || |||||
Sbjct 37118 TCACCAGCAATGGATTTTGCCAACAGTGTTTTCCCTGTCCCTGG 37075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589837191298520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |