Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq11998 86.0 7e-12 >seq11998 Length=46925 Score = 86.0 bits (94), Expect = 7e-12 Identities = 189/284 (67%), Gaps = 12/284 (4%) Strand=Plus/Minus Query 9279 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 9338 |||||||||||||| || || | |||||| | ||||| || || || ||||| | Sbjct 37352 TCAAAACCATCCATTTCCACTAACATTTGGTTCAATGTTTGCTCACGCTCGTCATTACC- 37294 Query 9339 GGCATACCACCA------GCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAG 9392 ||||||| |||| ||||| || ||||| |||||||||||||| || Sbjct 37293 -----ACCACCATGTCCTGCACCACGTTGGCGCCCTACGGCGTCAATCTCATCAATAAAA 37239 Query 9393 ACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCC 9452 | ||| || || ||||| ||| | ||||| | || || || | | || || Sbjct 37238 ATAATGCAGGGAGCATTTTTTTTAGCGTTCTCAAACATGTCACGTACACGTGCCGCTCCA 37179 Query 9453 ACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGAT 9512 || ||||||||||| |||||||||| | | | ||| || || || || || | | Sbjct 37178 ACGCCAACAAACATTTCCACAAAGTCAGAGCCAGAAATACTGAAAAACGGAACCTTTGCT 37119 Query 9513 TCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTgg 9556 ||||| ||||||| | || | || || || || || ||||| Sbjct 37118 TCACCAGCAATGGATTTTGCCAACAGTGTTTTCCCTGTCCCTGG 37075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589837191298520