Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_015265.1
Length=37236
Score E
Sequences producing significant alignments: (Bits) Value
seq1559 89.7 1e-13
seq12005 82.4 2e-11
>seq1559
Length=191813
Score = 89.7 bits (98), Expect = 1e-13
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 9477 GAAGGCACGCTGGTGGATGCGACGATCTTCGAGGCTGCGCCGTCCACGAAGAACGCCGGG 9536
|| ||||| ||| | ||||| || ||| ||| || || | || | ||| ||| |
Sbjct 32676 GAGGGCACACTGATTGATGCCACCATCATCGCAGCGCCGTCTTCTAGGAAAAACAAAGAA 32617
Query 9537 AAGAGCCGTGACCCGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATG 9596
| | |||||||| ||||||| |||| |||||||||||||| ||||| || ||||||
Sbjct 32616 CATACGCGTGACCCAGAGATGCGCCAGAGCAAGAAGGGCAACGAATGGTACTTTGGCATG 32557
Query 9597 AAGGCCCATGTCGGCGTCGACGCCGACTC 9625
||||| ||| || ||| | | |||||||
Sbjct 32556 AAGGCGCATATCAGCGCCAATACCGACTC 32528
>seq12005
Length=72809
Score = 82.4 bits (90), Expect = 2e-11
Identities = 92/121 (76%), Gaps = 4/121 (3%)
Strand=Plus/Minus
Query 9545 TGACCCGGAGATGCATCAGA-CGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGGCCC 9603
||| || | |||||| |||| |||||| ||||||| | || || ||||||||||| |
Sbjct 72293 TGATCCCGCGATGCAGCAGAGCGAAGA---GCAACGAATAATACTTTGGCATGAAGGCGC 72237
Query 9604 ATGTCGGCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAACG 9663
|| |||||| ||| | ||||| ||||||||||| | | | |||||| |||| ||| |
Sbjct 72236 ATATCGGCGCCGATACTGACTCTGGTCTGGTGCACAACTTACGCACCACAGCGGTCAAAG 72177
Query 9664 A 9664
|
Sbjct 72176 A 72176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119006074447148
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |