Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq4587 93.3 5e-14 >seq4587 Length=22293 Score = 93.3 bits (102), Expect = 5e-14 Identities = 125/172 (73%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 138279 AATGGTGCAGGTGCATCATTCCCTGCTATGTTGTATTCCAATTGGTTTACTTCATTCTCT 138338 |||||||||||||| || || ||| |||||| ||||| ||| | || | | | Sbjct 13659 AATGGTGCAGGTGCTAGCTTTCCAGCTCCGTTGTACTCCAAGTGGGCTGCTGATTACAAT 13718 Query 138339 AAAGACACAGGCAAC--AAAGTCAACTATCAAGCAGTTGGTAGTGGTGCAGGTGTCCGTC 138396 |||| || |||| ||| | ||||| || |||| ||| ||||||||| | |||| Sbjct 13719 AAAGCTAC--GCAAATTAAAATTAACTACCAGTCAGTGGGTTCAGGTGCAGGTATTCGTC 13776 Query 138397 AATTTAAAGCAAAAACTGTTGACTTCGGTGCCTCTGATGGTGCTGTGAAAGA 138448 || || ||||| |||| |||||||||||||| || || | | || ||||||| Sbjct 13777 AAATTGAAGCACAAACAGTTGACTTCGGTGCATCAGACGCTCCTTTGAAAGA 13828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563523597915520