Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq6120 98.7 8e-16 >seq6120 Length=7451 Score = 98.7 bits (108), Expect = 8e-16 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 29799 CTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTC 29858 ||||| ||||| | ||| | |||||| ||||| || || || ||||| || || || Sbjct 5032 CTTCAATGGTTCTATGTGGTTACTGTAGACATGAGCATCGCCAAGCGTGTGAACGAAGTC 4973 Query 29859 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 29918 |||||||| || || || || ||||| ||||||||||| || || | || |||||| Sbjct 4972 TCCCGGTTTAAGGCCCGTCACATGAGCTATCATGTACGTAAGCAGTGCATACGAGGCGAT 4913 Query 29919 GTTAAAGGGTACCCCGAGCCCCATGTC 29945 ||||||||| || || || ||||| || Sbjct 4912 GTTAAAGGGCACACCCAGACCCATATC 4886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408520623934229