Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq489 120 2e-22
seq12041 95.1 1e-14
>seq489
Length=77466
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| ||||| ||||| || || ||||| || ||||| |||| | || | |||| |||
Sbjct 4412 ACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCGGAAAGTGTGCGTCCATCTTCC 4471
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| |||||| || ||||| |||| ||||||||| || || |||||||| ||||| || ||
Sbjct 4472 AGTTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGG 4531
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || ||| | || | |||||||| | || || || | || | || ||
Sbjct 4532 ATCTTAGCCTTGACATTCTCGATGGTGTCAGAAGGCTCAACCTCCAAGGTAATGGTCTTA 4591
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| | |||||| || |||||||||||
Sbjct 4592 CCGGTGAGAGTTTTGACGAATATCTGCAT 4620
>seq12041
Length=12732
Score = 95.1 bits (104), Expect = 1e-14
Identities = 202/300 (67%), Gaps = 4/300 (1%)
Strand=Plus/Plus
Query 13651 ATTGAATTTTCGTTTACAACCTTCAAAATTCATGTGTCGTATTTTACCATAGATTGGTCG 13710
|| ||| ||||| ||||| || | | ||||||| | || | ||| ||| ||| || |
Sbjct 4764 ATCGAACTTTCGCTTACATCCCTGATAATTCATATAGCGCACTTTGCCAAAGACAGGCCT 4823
Query 13711 CTCCATCCAGGCACGATCGTGAGTTCCGCATATTGACCACATGCAACCGGCATAACCGTT 13770
||| ||| | | || || | || | || |||||||||||||| | ||||| ||
Sbjct 4824 CTCGGCCCATCCTTGGTCATGTATACCACCAATGGACCACATGCAACCCACGTAACCATT 4883
Query 13771 GGGATCGCGTCCATCCAAACTGTATTTGTCGTTGAAATATATGGCGTTGATT--AAAGCC 13828
||||| | |||||| || || || || || || | ||| |||| ||| ||||||
Sbjct 4884 CGGATCCCTTCCATCTAAGCTATACTTATCATTAAGCAGTATAGCGT--ATTCCAAAGCC 4941
Query 13829 ACTGTAGGCGAAATAGACCATTCTAATAtttttttAGCCCAATATATTCTCATATATCCG 13888
|||| | |||||| | ||| ||||| |||||||| || | || | | ||
Sbjct 4942 TGCTCCGGCGTTTCTGCCCATTCAAGTATCTTTTTTGCCCAATACATGCGCAAAAAGCCA 5001
Query 13889 TGCATTTTGCCTTGCGTTTTAAGCTGTGTCTGAGCAGCGTTCCACAATATGTCATGAGTT 13948
|||||||| ||| || ||| || ||| ||||||||||| || || ||||||
Sbjct 5002 TGCATTTTAGCTTCGCTTACAAGTTGCAACTGTGCAGCGTTCCATAAATCATCGTGAGTT 5061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396184352361861
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |