Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq4404 109 1e-18
>seq4404
Length=3800
Score = 109 bits (120), Expect = 1e-18
Identities = 166/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484
||||| || ||||||||||| || || || || ||||| || |||||| | ||||||
Sbjct 2375 TACATTTCGGAGTGCACATTTTCCATGGCAATTTGGAAGCCATAGAAGCAACGTGCCTCA 2316
Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544
||| || |||||| | ||| | ||| | || ||| ||||| || || ||||| |||
Sbjct 2315 GTCACTTGAACTTCTTGGCTGAAACGCTCGACCAAATTTTCATTCACAATGCCATCGGAA 2256
Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTC 48604
||||||||||| || | || || | |||||| |||||||| | || || | |
Sbjct 2255 GCAGCAAAGAAAGCCAACACGTGCGATATGAAATGACGCTCGTTATCAGTAAGCTTAGCC 2196
Query 48605 CAGCCCTGT-ACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657
|| |||| | ||| || ||| || ||||| || || |||||||| || ||
Sbjct 2195 CA-ATCTGTCAAGTCCTTCGACAGATCTACTTCCTCAACTGTCCAGAATGATGC 2143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931306053272320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |