Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4404 93.3 8e-14 >seq4404 Length=3800 Score = 93.3 bits (102), Expect = 8e-14 Identities = 121/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 25574 ACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGA 25633 |||||| ||||| | | |||||||||| |||||||| || || ||||| || |||| Sbjct 2213 ACGAGCGTCATTTCATATCGCACGTGTTGGCTTTCTTTGCTGCTTCCGATGGCATTGTGA 2272 Query 25634 ACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCA-GTACGTGGAGGCCAAGTGTTTC 25692 | || ||| || |||| | |||| | ||||| || || || |||| || ||| Sbjct 2273 ATGAAAATTTGGTCGAGCGTTTCAGCCAAGAAGTTCAAGTGACTG-AGGCACGTTGCTTC 2331 Query 25693 TACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTAT 25737 || || ||||| || ||||| |||||||||||||| || ||||| Sbjct 2332 TATGGCTTCCAAATTGCCATGGAAAATGTGCACTCCGAAATGTAT 2376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928618707565120