Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq489 107 2e-18
>seq489
Length=77466
Score = 107 bits (118), Expect = 2e-18
Identities = 154/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|||||||| ||||| || ||||| | || ||||| ||||||||| || || |||
Sbjct 4623 AAAATGCAGATATTCGTCAAAACTCTCACCGGTAAGACCATTACCTTGGAGGTTGAGCCT 4564
Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
|| || || | | || ||||| || ||| ||||||||||| | ||| |||
Sbjct 4563 TCTGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAAGAGGGCATTCCCCCAGAC 4504
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATT 28728
|||||| | || |||||||| ||||| ||| |||||||| | | ||| | |||| |
Sbjct 4503 CAACAGCGTCTGATCTTTGCCGGCAAGCAACTGGAAGATGGACGCACACTTT--CCGACT 4446
Query 28729 ATAACATTCAAAAAGAATCTACTCTGCACATGGTA 28763
| ||||||||||| || || || ||||| |||||
Sbjct 4445 ACAACATTCAAAAGGAGTCGACCCTGCATTTGGTA 4411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425303839875267
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |