Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq489 107 2e-18 >seq489 Length=77466 Score = 107 bits (118), Expect = 2e-18 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 |||||||| ||||| || ||||| | || ||||| ||||||||| || || ||| Sbjct 4623 AAAATGCAGATATTCGTCAAAACTCTCACCGGTAAGACCATTACCTTGGAGGTTGAGCCT 4564 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | || ||||| || ||| ||||||||||| | ||| ||| Sbjct 4563 TCTGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAAGAGGGCATTCCCCCAGAC 4504 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATT 28728 |||||| | || |||||||| ||||| ||| |||||||| | | ||| | |||| | Sbjct 4503 CAACAGCGTCTGATCTTTGCCGGCAAGCAACTGGAAGATGGACGCACACTTT--CCGACT 4446 Query 28729 ATAACATTCAAAAAGAATCTACTCTGCACATGGTA 28763 | ||||||||||| || || || ||||| ||||| Sbjct 4445 ACAACATTCAAAAGGAGTCGACCCTGCATTTGGTA 4411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425303839875267