Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq18134 293 2e-73
seq17788 125 5e-23
seq13045 111 1e-18
seq1697 111 1e-18
seq8176 105 4e-17
seq1648 102 5e-16
seq489 100 2e-15
seq10147 89.7 3e-12
seq4416 86.0 4e-11
>seq18134
Length=7618
Score = 293 bits (324), Expect = 2e-73
Identities = 396/547 (72%), Gaps = 6/547 (1%)
Strand=Plus/Minus
Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392
||||||||||||| || || || ||| |||||| | ||| | || |||| ||||| |
Sbjct 5245 TTGGTATTGATTTGGGCACAACCTACTCTTGTGTGGGTGTGTTCCAGCATGGCAAAGTTG 5186
Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452
|||| |||||||| || || |||||| | || ||||||||||||||| | || || ||||
Sbjct 5185 AAATTATTGCCAACGATCAGGGTAATCGTACCACACCATCATATGTTGCCTTCACCGAAA 5126
Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512
| || | ||| || || ||||| || ||| |||| | || || || ||||| || |
Sbjct 5125 CCGAGCGTCTGATCGGTGATGCCGCCAAAAATCAGGTGGCCATGAACCCAGTTAACACCA 5066
Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572
| |||||||| || | ||||||||||| || || || ||| | |||| ||||| || |
Sbjct 5065 TATTTGATGCCAAGCGTTTGATTGGTCGCAAATTCGACGATTCAGCTGTGCAATCGGACA 5006
Query 474573 TGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG--CAAT 474630
|| || |||||||| |||| || || || | ||| || ||| | || ||| |
Sbjct 5005 TGAAGCACTGGCCTTTCGAGGTTATCAACGTCGATGGCAAGCCAAAGATCCAAGTTTGCT 4946
Query 474631 ACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAA 474690
||| | | ||| | ||| || | || || ||||||| || |||||||| | ||
Sbjct 4945 ACAAG--GATGAGAAGAAAGCCTTCTTCCCTGAGGAAATTTCATCTATGGTTTTGTCTAA 4888
Query 474691 AATGAAACAAACCGCGAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAATTACTG 474749
||||| | ||||| | || ||||| ||||| || || |||| || || ||||
Sbjct 4887 GATGAAGGAGACCGCCGAAGCCTA-CTTGGGCAAGACCGTGACAAATGCTGTCATCACTG 4829
Query 474750 TTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAG 474809
| || || || || || ||||| ||||||||||| ||||| ||||| || | ||||| |
Sbjct 4828 TGCCCGCTTACTTCAACGATTCGCAACGTCAAGCGACTAAGGATGCTGGTACTATTGCTG 4769
Query 474810 GTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTG 474869
|| | |||||| | |||||||| || ||||| || || ||||| |||| ||||||||||
Sbjct 4768 GTTTAAATGTTCTCCGTATTATCAACGAACCCACTGCCGCCGCTATTGCCTATGGTCTTG 4709
Query 474870 ATAAGAA 474876
| |||||
Sbjct 4708 ACAAGAA 4702
>seq17788
Length=7208
Score = 125 bits (138), Expect = 5e-23
Identities = 134/177 (76%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652
||||||||||| || |||| |||||| | || || |||||||| || ||||||||
Sbjct 2377 ATTATAATCAGAGAGTGTTCGACCATCTTCCAACTGTTTGCCAGCAAAGATTAGACGTTG 2318
Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712
|||||| |||||||||||||| ||||| |||||||| ||||||| ||| ||||| ||
Sbjct 2317 TTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTGTC 2258
Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || ||||| || || || ||||| ||||| || ||||| ||||| ||
Sbjct 2257 CGAAGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACAAAAATCTG 2201
>seq13045
Length=15672
Score = 111 bits (122), Expect = 1e-18
Identities = 222/326 (68%), Gaps = 10/326 (3%)
Strand=Plus/Plus
Query 297309 TCGTGTTACCGGTGTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAAT 297368
|||| |||| || || |||||||||||||| || ||||| ||||| | || |||
Sbjct 7744 TCGTATTACGCCAGTCTTTGATTGTTGGTTTGAGTCTGGTTCCATGCCCTTTGCGCAACA 7803
Query 297369 TCATTATCCTTTTGAAAATTCCGAAATTTTAGACACTTCACAAG--ATTATATTGCAGAT 297426
|||| || || || || ||| | || |||||| | ||| ||| |||
Sbjct 7804 GCATTTCCCATTCGAGAA---CGAGA----AGG-ACTTCATGAACAATTTCCCTGCTGAT 7855
Query 297427 TTTATAACAGAATCAATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCT 297486
||||| | || |||||||| || | || ||||| || || | | ||| ||||
Sbjct 7856 TTTATTTCCGAGGGCATTGATCAGACTCGCGGCTGGTTCTACACGCTGCTTGTTATTTCA 7915
Query 297487 ACAGCTATATTTAACAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCA 297546
||| | ||| |||| | ||||||||||| | |||| | || ||||| ||
Sbjct 7916 ACAATACTCTTTGGCAAAGCGCCATTTAAAAATCTCATTGCAAGCGGTCTTGTTCTGGCT 7975
Query 297547 GCTGATGGACAAAAAATGTCAAAAAGTAAAGGTAATTATCCTGATCCAAATATTTTGATG 297606
||||||| ||||| |||||||| || ||| ||||| |||||||| | || || ||
Sbjct 7976 TCTGATGGTCAAAAGATGTCAAAGAGCAAAAAGAATTACCCTGATCCTATGCTTGTGGTG 8035
Query 297607 GATAAATATGGTGCAGATACTTTACG 297632
||||||||||||| ||| |||| ||
Sbjct 8036 CATAAATATGGTGCTGATGCTTTGCG 8061
>seq1697
Length=24975
Score = 111 bits (122), Expect = 1e-18
Identities = 237/347 (68%), Gaps = 8/347 (2%)
Strand=Plus/Minus
Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572
|||| ||||| || | || || |||||||| || |||||| | | | ||| ||||
Sbjct 13833 TTTTCGATGCAAAGCGTTTAATAGGTCGTAAATTCGATGATCCGAAAATTCAACAGGATA 13774
Query 474573 TGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AAT 474630
| |||||||| || || ||| | |||| ||| || || | || ||| |||
Sbjct 13773 TCAAGCATTGGCCATTCAAAGTGTTCAATGACAATGGCAAGCCGAAGATTGAAATTGAAT 13714
Query 474631 ACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAA 474690
| | || ||| ||| | ||| | || || ||||| ||||||||||| | ||
Sbjct 13713 TTAAG--GGCGAACGTAAGCGTTTTGCGCCCGAGGAAATTAGCTCAATGGTTTTGACGAA 13656
Query 474691 AATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAAC-TGATGCAGTAATTACT 474748
|||| ||| || || || ||| |||| | ||| | |||||| || || |||
Sbjct 13655 AATGCGTGAAATTGCTGAAGTC-TAT-TTGGGCGGCAAGGTGCGTGATGCGGTCATCACT 13598
Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808
|| || || || || ||||| || || || || || || |||||||| || ||||||
Sbjct 13597 GTGCCCGCCTACTTCAATGACTCACAGCGCCAGGCCACCAAAGATGCTGGCTCAATTGCT 13538
Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACT 474855
||||| ||||| || ||||| || ||||| |||||||||||| |||
Sbjct 13537 GGTCTCAATGTGTTGCGTATAATAAATGAGCCAACAGCAGCCNGACT 13491
Score = 104 bits (114), Expect = 2e-16
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 474767 GATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGT 474826
|| || || || || || || |||||||| ||| |||||| ||||| ||||| || ||
Sbjct 13494 GACTCACAGCGCCAGGCCACCAAAGATGCTGGATCAATTGCTGGTCTCAATGTGTTGCGA 13435
Query 474827 ATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAATTCTGACAAA 474886
|| || ||||| ||||||||||| || ||||| |||||||| ||||| ||| | |
Sbjct 13434 ATAATAAATGAGCCAACAGCAGCTGCGCTTGCCTATGGTCTGGATAAAAATCTTAAAGGC 13375
Query 474887 GAAGTAAATGTTTTAATCTTTGATTGTGGAGG 474918
||| ||||| || ||||||||| ||| ||
Sbjct 13374 GAAAAGAATGTCTTGATCTTTGATCTTGGTGG 13343
>seq8176
Length=26989
Score = 105 bits (116), Expect = 4e-17
Identities = 137/187 (73%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 474688 CAAAATGAAACAAACCGCGAGCTCATAT-CTTGGACAAGAAGTAACTGATGCAGTAATTA 474746
||| |||||| |||| || || || | || ||| || |||||||| ||||| ||||
Sbjct 15124 CAAGATGAAAAAAACGGC-AGAAGATTTTCTGGGAGAAACCGTAACTGAAGCAGTGATTA 15182
Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806
|||| |||||||| |||||||| | ||||| |||||||||||||| || || | ||||
Sbjct 15183 CTGTACCAGCATACTTTAATGACGCACAACGCCAAGCAACTAAAGACGCAGGGCGTATTG 15242
Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTC 474866
| || || | || || ||||| ||||| ||||| || || || | || | |||
Sbjct 15243 CTGGGCTGGAAGTCAAGCGCATTATCAATGAGCCAACCGCTGCGGCTTTGGCGTTTGGAT 15302
Query 474867 TTGATAA 474873
| |||||
Sbjct 15303 TGGATAA 15309
Score = 104 bits (114), Expect = 2e-16
Identities = 262/391 (67%), Gaps = 8/391 (2%)
Strand=Plus/Plus
Query 475881 TTGTTG-ACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAAT 475939
|||||| | ||||| ||||| ||| | ||| ||||||| | || || | ||||| ||
Sbjct 15935 TTGTTGGATGTAACGCCACTATCACTTGGTATTGAAACCTTGGGTGGAGTCATGACCAAA 15994
Query 475940 CTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCT 475999
| |||| || ||| || |||| ||| |||| | | | | || ||| |
Sbjct 15995 ATGATTGGCAAAAACACAACTATTCCAACCAAACATGCGCAGACCTACTCGACTGCTGAA 16054
Query 476000 GATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGAT 476059
|| ||||| | | || || || | | || |||| || ||| || || | | | |
Sbjct 16055 GACAATCAGCCGTCCGTTACAATTCGCGTTTTCCAAGGCGAGAGAGAAATCGCAAGTGCT 16114
Query 476060 AATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCT 476119
||||| ||||| |||||||||||||| ||| |||| || || ||||| | ||
Sbjct 16115 AATAAGTTGCTTGGCGAATTTAATCTTGAAGGGATTGCTCCAGCGCCGCGAGGATTGCCG 16174
Query 476120 CAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGAT 476179
|| |||||||| |||| |||||||| | ||||||||| | |||| | |||| |||
Sbjct 16175 CAGATTGAAGTATCTTTCGATATTGACTCTAATGGTATTTTGCATGTCAGTGCTAAGGAT 16234
Query 476180 AAATCTAGTAACAAGAGTAAA-AATATAACTATTACAAACAATC-GTGGTAGATTTACTG 476237
||| || | || || ||| || || || |||| || ||| | |||| || |||
Sbjct 16235 AAAGGTACTGGTAA-AGAAAACAAAATTACCATTA-AAGCAAACTCTGGT---TTATCTG 16289
Query 476238 AAGAACAAATTCAACGTATGGTTGATGAAGC 476268
|||| | ||| | ||||||||| | || ||
Sbjct 16290 AAGATGAGATTGAGCGTATGGTTAAAGACGC 16320
>seq1648
Length=58106
Score = 102 bits (112), Expect = 5e-16
Identities = 106/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796
||||| |||| |||||||| ||||| || || || |||||||| || |||||||||||
Sbjct 33373 GCAGTCGTTACAGTTCCAGCTTATTTCAACGACTCACAACGTCAGGCTACTAAAGATGCT 33314
Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856
|| || || |||||||||||| | || | || ||||| ||||| || || || |||
Sbjct 33313 GGTCAGATAGCTGGTCTTAATGTTCTTCGCGTCATCAATGAGCCAACCGCTGCTGCCCTT 33254
Query 474857 GCTTATGGTCTTGATAAGA 474875
|| ||||| | || ||||
Sbjct 33253 GCATATGGCATGGACAAGA 33235
>seq489
Length=77466
Score = 100 bits (110), Expect = 2e-15
Identities = 159/222 (72%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGA 480608
||| ||||||||||| | ||| || || ||| |||| ||| || || || | ||
Sbjct 4399 ACGCAGACGGAGTACCAAATGCAGGGTCGACTC-CTTTTGAATG-TTGTAGTCGGAAAGT 4456
Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668
|| | |||||| |||||||| || ||||| || ||||| ||||| || || |||||
Sbjct 4457 GTGCGTCCATCTTCCAGTTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCTGGGGGAATG 4516
Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTG-TGAAGTTTC 480727
|| || ||||| || ||||| |||||| || || || |||| | | || | |
Sbjct 4517 CCCTCTTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAAGGCTCAACCTCC 4576
Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|||| |||| || |||||||||||||| || ||||| || ||
Sbjct 4577 AAGG-TAATGGTCTTACCGGTGAGAGTTTTGACGAATATCTG 4617
>seq10147
Length=26039
Score = 89.7 bits (98), Expect = 3e-12
Identities = 191/280 (68%), Gaps = 4/280 (1%)
Strand=Plus/Minus
Query 357397 AATTTAGAACCAAAACCATTTTTACCACCCACTGTTTTCTTTTCGTTTTTATCATAATTA 357456
||||| | |||| |||||||| ||||||| ||| ||||| | | | || ||
Sbjct 10963 AATTTGGCACCATAACCATTTCGACCACCCGTGACTTTTTTTTCATCATCGTTGTAGTTC 10904
Query 357457 GTTGATGTCAAAAGTTCTCCAAAAATCATAGATGGTACTAAAATTTTATGCTCTTTATGT 357516
| || ||||| || | |||||| ||||||| || || || || || |||||||| ||
Sbjct 10903 GACGAGGTCAATAGATGTCCAAAGATCATAGTCGGAACAAACATCTTCTGCTCTTTGTGC 10844
Query 357517 TCAACCACATCAATACCATCACCATTATTCCAGACAGTAATCTTACCTGTATCTTGTTCT 357576
| || ||||| | ||||||||||| || | |||| | | || | ||
Sbjct 10843 ATAGTAACTGGTATACCCTGGCCATTATTCCAAACCGAAATCATGTTCTTCTCCGGATCG 10784
Query 357577 ATATTAACTTTTATTGTATTACAT-GTC-GAACACCTATTATTATGATCTGCTGCGTTAA 357634
|||| || |||||| | ||| ||| ||| | ||| | | |||| |||||| || ||||
Sbjct 10783 ATATCAATTTTTATGGCATT-CATAGTCTTATCACGT-TGTTTATTATCTGCGGCATTAA 10726
Query 357635 CTAATACTTCATCATAAATTTTATATAAACCAGGTACATA 357674
| | | |||||| | |||||||| | ||| || |||||
Sbjct 10725 CGAGGATTTCATCGAATATTTTATACAGACCGGGAACATA 10686
>seq4416
Length=2693
Score = 86.0 bits (94), Expect = 4e-11
Identities = 112/156 (72%), Gaps = 7/156 (4%)
Strand=Plus/Minus
Query 474728 GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACT 474787
|| || ||||| || | || || || || ||||| |||||||| || || || || ||
Sbjct 1014 GTGACGGATGCCGTGGTCACAGTGCCTGCCTATTTCAATGATTCACAGCGGCAGGCCACA 955
Query 474788 AAAGATGCGGGAAGA-------ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACC 474840
||||||||| || | ||||| || | ||||| | | || |||||||| ||
Sbjct 954 AAAGATGCGNGACGCTGGCGCCATTGCGGGCTTAAATGTGCTGAGAATCATTAATGAGCC 895
Query 474841 AACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876
||| || || ||| |||| ||||||||||| |||||
Sbjct 894 AACGGCCGCGGCAATTGCCTATGGTCTTGACAAGAA 859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3267343908547004
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