Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq7139 150 2e-31
seq6538 95.1 2e-14
>seq7139
Length=3176
Score = 150 bits (166), Expect = 2e-31
Identities = 331/491 (67%), Gaps = 19/491 (4%)
Strand=Plus/Minus
Query 47583 CCAACCCAATTTTTTCTTTGCCTTAGAGGCATCACCTAATAAGGTCTCTACTTCAGCAGG 47642
||||| ||| | | || || || || |||||||| | || || || || | |||
Sbjct 1790 CCAACTCAACTCTCGTTTGGCTTTCGAAGCATCACCAAGTAGTAGATCGACCTCCGTAGG 1731
Query 47643 ACGGAAATATTTAGAGTCAATTCTGATAACCGTTTTACCA---TCAGAATCAATACCAAC 47699
|| |||||||||| | ||||| || ||| | ||| || |||||||||||
Sbjct 1730 TCGAAAATATTTAGGATTAATTCGTATGCGTGTTATTCCAGTTTCCAGCTCAATACCAAC 1671
Query 47700 TTCATCAAGACCAGAACCTTCCCATCTAATATTCAT----ATCAAAATAAGGTGCAGATT 47755
|||||||| ||| | || ||| ||| || | | |||| | | || | ||
Sbjct 1670 TTCATCAATCCCATGATTTTTCCAAACAAT-TTGACGACCAACAAATTTAAACGCCGCTT 1612
Query 47756 CCTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATCATCAGGTT 47815
|| ||||||| ||| || | | | || || ||||| ||| |||| ||| |
Sbjct 1611 CC---ACAAACTCACGCACGCTGTGTGTTTCACCAGTAGCAATGACATAATCCGAAGGAT 1555
Query 47816 CTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCAC 47875
| || || |||||||| | ||||||||| |||||||| || || || ||||| ||||
Sbjct 1554 CATCCTGCTGAAGCATCATCCACATAGCTTCGACATAGTCAGCAGCGTGACCCCAATCAC 1495
Query 47876 GAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTT- 47934
| || || ||||| || | | ||| | ||| ||| | |||||| || ||||
Sbjct 1494 GTTTTGAGTCCAGATTCCCCAACTCAAAATAATCTAGCTGA--TTCAGAAATA--TTTTG 1439
Query 47935 ---AATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGA 47991
| || | || |||||||| || |||||| |||||||||| | ||| ||||| |||
Sbjct 1438 GCGACTGAACGAGTGATCTTACGTGTAACAAAATTTTCACCACGACGTGGTGATTCGTGA 1379
Query 47992 TTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATC 48051
||||||||||| || | || ||| |||| | || | ||||||||| || ||| |||
Sbjct 1378 TTAAAAAGAATGCCGTTGCAAGCAAACATACTATAAGCTTCACGATAATTAACTACAATC 1319
Query 48052 CAGTACCCATA 48062
||| | |||||
Sbjct 1318 CAGAAGCCATA 1308
>seq6538
Length=3451
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 53741 TGGAGAATAACGGACTCGAACCGTTGACATCCTACTTGCAAAGCAGGCGCTCTA-CCAAC 53799
|||||||||| ||| ||||||| ||||| |||| | ||||| |||||||||||| |||||
Sbjct 3252 TGGAGAATAAGGGAGTCGAACCCTTGACCTCCTGCGTGCAAGGCAGGCGCTCTAGCCAAC 3193
Query 53800 TGAGCTAATTCCCC 53813
||||||||||||||
Sbjct 3192 TGAGCTAATTCCCC 3179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665332410344360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |