Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq11998 91.5 2e-13
>seq11998
Length=46925
Score = 91.5 bits (100), Expect = 2e-13
Identities = 251/380 (66%), Gaps = 21/380 (6%)
Strand=Plus/Plus
Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374
||||| || || || || || | || | |||| || |||||| |||| || || ||
Sbjct 37075 CCAGGGACAGGGAAAACACTGTTGGCAAAATCCATTGCTGGTGAAGCAAAGGTTCCGTTT 37134
Query 175375 ATCCAGTGCT-CTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGT 175433
|| ||| | ||| | | |||||||||| ||||||||||| || || || | | ||
Sbjct 37135 TTC-AGTATTTCTGGCTCTGACTTTGTGGAAATGTTTGTTGGCGTTGGAGCGGCACGTGT 37193
Query 175434 TCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGAT 175493
|| || | ||||| | ||| ||||| || || ||| | || |||||||||||
Sbjct 37194 ACGTGACATGTTTGAGAACGCTAAAAAAAATGCTCCCTGCATTATTTTTATTGATGAGAT 37253
Query 175494 TGATGCGGTGGGCAAGCAACGCAGCGC------TGGTGGTATGCCAGCAAATGACGAGAG 175547
||| || || || ||||| | || ||||||| | ||||||||| |
Sbjct 37254 TGACGCCGTAGGGCGCCAACGTGGTGCAGGACATGGTGGT------GGTAATGACGAGCG 37307
Query 175548 AGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGA---CAATGAGACTGG 175604
|| |||||| | || ||| | | || |||||||| ||||| |||| | ||
Sbjct 37308 TGAGCAAACATTGAACCAAATGTTAGTGGAAATGGATGGTTTTGAAACCAATTTGGGTGT 37367
Query 175605 CATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCC 175664
|| || | ||||||| ||||| || ||||| | ||| ||| | | |||||
Sbjct 37368 AATAGTCG---TTGCGGCAACTAACCGTCCAGATATTTTGGATAGCGCTTTGTTGCGCCC 37424
Query 175665 GGGTCGTTTTGATCG-CAAG 175683
||| || |||||||| ||||
Sbjct 37425 GGGACGATTTGATCGTCAAG 37444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596424387502240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |