Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq17788 163 6e-35
seq489 114 3e-20
>seq17788
Length=7208
Score = 163 bits (180), Expect = 6e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||| | ||| || || || ||||| ||||| | ||||| |||||||||||||||
Sbjct 2424 CCACCACGAAGGCGCAAAACCAAATGCAAAGTCGATTCTTTCTGGATATTATAATCAGAG 2365
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
| |||||| |||| ||||| ||||| ||||||||||||| | |||||||| || ||
Sbjct 2364 AGTGTTCGACCATCTTCCAACTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGAGGA 2305
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
||||||||||| || || || || ||| ||||| |||| || || | ||| ||
Sbjct 2304 ATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGAAGGTTCGACC 2245
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| ||||| ||||| ||||| || | ||||||| ||| |||||||| ||
Sbjct 2244 TCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACAAAAATCTGCATGTT 2195
>seq489
Length=77466
Score = 114 bits (126), Expect = 3e-20
Identities = 172/242 (71%), Gaps = 2/242 (1%)
Strand=Plus/Plus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATA 192357
||| |||||||||||| | ||||| | ||| ||||| | || | || |||| || ||
Sbjct 4383 GTTCAATAATACCACCACGCAGACGGAGTACCAAATGCAGGGTCGACTCCTTTTGA-ATG 4441
Query 192358 TTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGT 192417
|| || || || | ||| ||| |||| |||| ||| || || |||||||| | | ||||
Sbjct 4442 TTGTAGTCGGAAAGTGTGCGTCCATCTTCCAGTTGCTTGCCGGCAAAGATCAGACGCTGT 4501
Query 192418 TGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCT 192477
|| || || || || || ||||| || || || ||| || ||||| || | ||
Sbjct 4502 TGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCA 4561
Query 192478 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| | || || || | |||||||| ||||| || | ||||| | ||||||||||||
Sbjct 4562 GAAGGCTCAACCTCCAAGGTAATGGTCTTACCGGTGAGAGTTTTGACGAATATCTGCATT 4621
Query 192538 TT 192539
||
Sbjct 4622 TT 4623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984234374393550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |