Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_021299.1
Length=80955
Score E
Sequences producing significant alignments: (Bits) Value
seq12641 336 1e-87
>seq12641
Length=70532
Score = 336 bits (372), Expect = 1e-87
Identities = 647/946 (68%), Gaps = 16/946 (2%)
Strand=Plus/Plus
Query 59266 GCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACC 59325
|| || |||||||| ||| | ||||| || || | || |||||||| || || ||
Sbjct 61600 GCGATTAACTGGAATCGCATTGAAGACGAAAAAGACTTAGAAGTCTGGAATCGTTTAACG 61659
Query 59326 AACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGCACG 59385
|| || |||||||| ||||| | || | || || || || || | |||| |||
Sbjct 61660 TCAAATTTTTGGCTGCCGGAGAAAGTGCCACTTTCAAATGATATTCCATCTTGGGCAACG 61719
Query 59386 CTGACGGAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATGCTCGAC 59445
|| |||| | ||||||||| || || || || || || || || ||||| | || ||
Sbjct 61720 CTAACGGCGCAAGAGCAAGAGCTGACCATTCGTGTGTTTACAGGTTTGACGCTACTTGAT 61779
Query 59446 ACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCGCACGAG 59505
||| | ||| || |||||| || | |||| || || || | ||||| |||||
Sbjct 61780 ACGGTACAGAATGTGGTAGGTGCTTTGTGTTTGATTCCAGATGCTGTGACGCCACACGAA 61839
Query 59506 GAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACAGCAAC 59565
||| |||| || || || ||| | || ||||| |||| |||||||| || |||||
Sbjct 61840 GAGTCGGTTTATACCAATATCTCTTTTATGGAAGCGGTACACGCGAAAAGTTACAGTTCA 61899
Query 59566 ATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTCGGAGGAG 59625
|| || || || || || | ||||| | || | || || |||||| | ||
Sbjct 61900 ATTTTTTCTACTCTATGTCAGATGAAGGATGTGGATGAAGCATTTCGCTGGA--GCATAG 61957
Query 59626 AATCCGAA--CCTGCAACGCAAGGCTCAGATCGTCCTGGACTACTACCAGGGTGACGATC 59683
|| |||| ||||||| |||||| |||| || ||| | || | || || || |
Sbjct 61958 AAAACGAATTCCTGCAAAACAAGGCAAAGATTGTATTGGGGCATTATCGTGGGGATGACC 62017
Query 59684 CGCTGAAGCGGAAGGTGGCCTCGACGTTGCTGGAGGGGTTCCTGTTCTACTCGGGCTTCT 59743
| | | ||| ||||| ||| || | ||| || | ||||| || ||||| |
Sbjct 62018 CTTTAATGCGTAAGGTTGCCAGCGTTTTCTTAGAGTCATTTTTATTCTATTCTGGCTTTT 62077
Query 59744 ACCTGCCGATGTACTGGTCTAGTCGGGGGAAGCTGACGAACACGGCCGACATGATCCGGC 59803
| |||| ||||||||| |||||| | || |||| || ||||| ||| | ||| |
Sbjct 62078 ATTTGCCAATGTACTGGAGTAGTCGAGCAAAATTGACTAATACGGCGGACTTAATCAGAT 62137
Query 59804 TCATCATTCGTGACGAGGCGGTGCACGGCTACTACATCGGATACAAGTTCCAGCGCGGCC 59863
| || |||||||| || ||||||||||| || ||||| || || || || |||| |||
Sbjct 62138 TGATTATTCGTGATGAAGCGGTGCACGGTTATTACATTGGTTATAAATTTCAGC-AAGCC 62196
Query 59864 TGGAGACTCAGAACGAGGC----TCGCCGCGAGGAGCTGAAGGACTACACGTACGGTCTG 59919
| | | | | | | | || || || || ||| |||| ||||| | || | ||
Sbjct 62197 T--ACAAT-AAAGCCACGCCTAGTCACCAAGAAGAGGTGAAAAACTACGCTTATGAATTG 62253
Query 59920 CTACTCGAGTTGTACGACAACGAGATTGAGTACACGCAGGATCTGTACGACGGCGTGGGA 59979
|| | || ||||| || ||||| | |||||||| ||||| | ||||||| || ||
Sbjct 62254 CTTCATGATTTGTATGATAACGAAGTCAAGTACACGGAGGATTTATACGACGCTGTTGGC 62313
Query 59980 CTGACTGAGGATGTCAAGATGTTCCTGCGCTACAACGCCAACAAGGCGCTGATGAATCTC 60039
||| || ||||| |||| |||| ||| |||||||||||||||||| | |||||| |
Sbjct 62314 TGGACCGAAGATGTAAAGAAGTTCTTGCACTACAACGCCAACAAGGCTTTAATGAATTTG 62373
Query 60040 GGCTACGAGGCGCTGTTCCC--GCGCGACGAAACCGAGGTGAATGCGGCGATCTTGGCGG 60097
|| | || || || || || || | || || || |||||| |||| ||||| ||||
Sbjct 62374 GGTTTTGAAGCACTCTTTCCTAGCTCTAC--TACGGATGTGAATCCGGCAATCTTAGCGG 62431
Query 60098 CACTGTCCCCTGGCGGGGACGAGAACCACGACTTCTTCTCGGGCTCTGGCAGCACGTATG 60157
| || || || ||| ||| || || || || ||||||||||| |||||| | ||||
Sbjct 62432 CCCTATCGCCAAGCGCGGATGAAAATCATGATTTCTTCTCGGGTTCTGGCTCGTCATATG 62491
Query 60158 TGATTGGCAAGGCTGAGGTTACGGAAGACGAGGATTGGGACTTCTA 60203
| ||||| || ||||| | ||| | ||| ||||| |||||||| ||
Sbjct 62492 TCATTGGTAAAGCTGAAGCTACAGCAGATGAGGACTGGGACTTTTA 62537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 258869748586548
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |