Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq2385 114 2e-19
seq1461 95.1 1e-13
>seq2385
Length=11938
Score = 114 bits (126), Expect = 2e-19
Identities = 187/267 (70%), Gaps = 2/267 (1%)
Strand=Plus/Plus
Query 1852373 TGGTACTCGGTGCCGCGCACAAACTCGAGTCCGCCCAGCGGCACGCCGAT-GTGCTGGAG 1852431
|| || |||||||| |||||||| || ||| ||||| || || | || | ||
Sbjct 11577 TGATATTCGGTGCCCTTCACAAACTTAAGCTTATCCAAAGGCACACCAATAGAGC-GCAG 11635
Query 1852432 CATGGCCTTGATGGCAAACTCGTACCAGCGGCACCGGTGTTCGACCAGGTCCCACGGCGT 1852491
||| | |||||| | |||||| | || || |||||| || ||| ||||
Sbjct 11636 CATTGACTTGATCACCGCCTCGTAGTACTGGGTGCGTAGTTCGAGGAGTGACCAAGGCGC 11695
Query 1852492 CTTGCCGTTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCTTGACCCGACAGCCGGC 1852551
||| ||| || | | |||||||| ||||||||||| || | ||| |||||||||
Sbjct 11696 CTTCATGTTATCTAAATAGGCGTGCAAATCGGCAAAGAGTATTGTCACCTCACAGCCGGC 11755
Query 1852552 CTGGAGAAAGTCGGCCAGTTTGAAGATGGGCACAAAGTAGCCTAGGTGCGGGTTGCCCGT 1852611
|| ||| |||||||| | || | ||||||||||||||| | | || || ||||| ||
Sbjct 11756 CTTGAGGAAGTCGGCAATCTTCGACATGGGCACAAAGTAGGCGACATGTGGTTTGCCTGT 11815
Query 1852612 CGGCGCCGTGCCCCAATATATGATCAG 1852638
|| ||| |||||||| || || ||||
Sbjct 11816 CGTCGCTGTGCCCCAGTAGATTTTCAG 11842
>seq1461
Length=74684
Score = 95.1 bits (104), Expect = 1e-13
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165
||||||| || ||||| || || | ||||| || || | || || || ||
Sbjct 73227 AGAAGCGTACTGACGATATTTCATCATGGGATGCTGATTTCCTGAAAGTTGACCAAGGCA 73168
Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225
| || || ||| |||| | || |||||||| | ||||| ||| ||| | ||| ||
Sbjct 73167 CACTTTTCGAGCTGATTTTGGCTGCCAACTATTTGGACATAAAGGGTCTTTTGGATGTTA 73108
Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285
||||| ||||||||||||||||||| ||||| | || |||||||| || || || |
Sbjct 73107 CTTGCAAAACTGTGGCCAACATGATCAAAGGCAAAACACCGGAGGAGATACGTAAAACAT 73048
Query 1592286 TTAACATCAA 1592295
||||||||||
Sbjct 73047 TTAACATCAA 73038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6105541154427941
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |