Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1169 206 2e-48
seq17788 152 5e-32
seq489 120 3e-22
>seq1169
Length=8375
Score = 206 bits (228), Expect = 2e-48
Identities = 1133/1791 (63%), Gaps = 51/1791 (3%)
Strand=Plus/Plus
Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212
||| ||||||||||| | ||| |||| || || || || || | | ||||||||||||
Sbjct 821 TTTGTCTACAGTAAATTGTATAGCATTTGCTGCCGGCTTTGTGCGTAAATAATACATTCC 880
Query 138213 CGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGG 138272
||||| | || || ||| | || | |||||| ||||| | | | ||| | ||
Sbjct 881 AGTTTTAAGACCTGCTTTCCATGAATAAAAGTGTATTGAAGTCAATTTACCATAATTTGG 940
Query 138273 TTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGC 138332
|| || | | ||| || || || || || || || |||||||| |||| ||| ||
Sbjct 941 TTCGGCGACATGTATATTGAATGACTGGCTTTGGTCAATGAAAGCTCCTCTATCTGCAGC 1000
Query 138333 CATGTTAATTAAATTTTTACTTTTCA----TCTCCCACACGGTCTTGTATAGATCACGAA 138388
||| || ||| || | ||| || ||||||| || || || |||| || | |
Sbjct 1001 CATTTTTATTG----TTGATTTTACAGAAATCTCCCAGACAGTTTTATATAAGTCTCTGA 1056
Query 138389 TATGTCGCGGTATTGTTGCAATATTTTGAAT-GCTCC-CGT-TGGCCGCAATGATGCGAT 138445
|| | || |||||| |||||| |||||| | || || | | | | || | ||
Sbjct 1057 CATCTTTAGGAATTGTTTCAATATGTTGAATAGAACCACGACTTGACACTATATT---AT 1113
Query 138446 TTCTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTA 138505
|| |||| ||||| | ||| || ||| | | || || || | ||| ||| |
Sbjct 1114 TTTTCATATCATCATCCCACAAATCCAATTCAGTTAAATCACGTAATAAATAATGGTTAA 1173
Query 138506 TGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAA 138565
|| ||||| || || | || || | | ||| || || ||| | || ||||
Sbjct 1174 CAACTTGAAACTCTCCAGATAAAACCCTTCTGGTGTATATATTTGAAGTGTAGGGTTCAA 1233
Query 138566 ACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAA 138625
| ||||| || ||||||| || ||||| || | || || ||||| || || | |
Sbjct 1234 ATGATTCATTATTTCCCATGATTTGAGCTGTAGAAGCTGTAGGCATTGGTGCTACAAGGA 1293
Query 138626 GAGAATTCCGTAAACCGTGAAGCTTGATTCGTT--CCTTGAGCGACGACCAGTCCCACAA 138683
| ||||| | || || | | |||| || | | || | | | ||| ||||||||
Sbjct 1294 GGGAATTTCTTACTCCAT-ACTTTTGAATCTTAAGCTTTAATTGTTG-CCAATCCCACAA 1351
Query 138684 ATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCC 138743
|| | |||||||| |||||| || || |||| ||||| ||| || || ||
Sbjct 1352 ATTCGTTGGTTTTTTTCCCCACATGTCATATTGTAGGATTCCTTTGCTTATAGGGCTTCC 1411
Query 138744 TTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACC 138803
|| |||| || || |||| ||| || |||| || || || || | | ||
Sbjct 1412 CTCATACGTCTCATAGGGACCATACTTTTCAGCCAGTTCACAACTTGCTTCTAAGGAACT 1471
Query 138804 ATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGG 138863
|| || || ||||| ||| || ||||| | | ||| || |||| || || ||
Sbjct 1472 GTAATATATCGTTTCAAAAATTTGTTGATTTAAAAGAAAGGCTTCTTCGCTTTCATAGGG 1531
Query 138864 CATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATG 138923
|| | | | | || || || | || || ||||| | || | ||| |||||
Sbjct 1532 ATAACGCATTAAAATTAGAGCATCAGCAAAGCCCTGAACGCCAATGCCAATAGGACGATG 1591
Query 138924 GCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTT 138983
| || || ||| | || ||| | ||||||||| || | || || ||||| ||
Sbjct 1592 TCTCAAGTTAGACTTTCGAGCCTCTTGCAAAGGATAATAATTGATGTCAATTATTTTATT 1651
Query 138984 TAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCC 139043
|| |||||| || | || || | |||||| ||| ||||| ||| |
Sbjct 1652 TAGATTTCGTGTTACTATTTTCGTTACTTCCTTTAACTTTTCGAAATCATATTTT----- 1706
Query 139044 GTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGC 139103
|| || ||| ||| ||||| | || | |||||| || | ||||| |||||
Sbjct 1707 -TTTTC--CGAGGAC----ACAAACATATTTAAGGCAATCGATGCCAAATTGCATACCGC 1759
Query 139104 CACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGT 139163
| ||| || || | ||||| |||||||| | || |||||||| || || || ||
Sbjct 1760 AATTTCATCTGGTGCAGAATATTCTACAATTTCTGTGCATAAATTACTGCATTTAATGGT 1819
Query 139164 ACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGT 139223
|| | ||||||||| |||||||||| ||||| | |||||| | | |||||| || ||
Sbjct 1820 GCCAACATTTTGTTGGTTGCTTTTTCTATTACATGAATCTTTAAACAACATATATGGAGT 1879
Query 139224 GCCAGTTTCCACTTGTGTCTCTATAAT-GAATTTGAACAAGTCCCTAGCTTGTATTT--- 139279
||||||||| ||||| | || || || ||| || || | |||| ||||
Sbjct 1880 GCCAGTTTCTACTTGAGCTTCAATTATAGAAAACCAAAGAGATTGT-GCTTTAATTTTTC 1938
Query 139280 GACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCG 139338
|| || | ||| | | || || ||||| || | | || || ||| |||||
Sbjct 1939 TACTTGCGCGACCTTCTT---GTTCATATTTTTCATATAACTTTTCAAACTCG-TCACCC 1994
Query 139339 TAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCC 139398
| | ||| ||| | | || || | ||||||||| || ||||| | | | ||
Sbjct 1995 CAAACATCATGAAGGCCAGGGCATTTATGAGGACACATAAGTGACCACTCTCGATCTTCC 2054
Query 139399 TTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTC 139458
| || || |||| || || || |||||||| | |||| | | ||||| || || |
Sbjct 2055 TCTACTCGTTTCATAAAAAGGTCTGGAATCCAAAGAGCGTAAAATAAATCACGAGCTCTG 2114
Query 139459 TTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCAT 139518
| |||||| || | || ||| | | | ||| || |||| ||| || |||||
Sbjct 2115 TGTTCTTCCTTTCCAGTATTTTTTTTTAGATCCAAGAACTCGAAAATGTCTGCATGCCAA 2174
Query 139519 GGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTGCCA---CCTTGATCGACGTGTCGT 139575
|| || | ||| || || | ||| || || || ||| |||||||| || | ||||
Sbjct 2175 GGCTCTAAATAAATAGCAAATGCTCCAGGCCTCTTACCACCTCCTTGATCTACATATCGT 2234
Query 139576 ACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTA 139635
| ||||||| || || | | ||| ||| | || || ||| ||| || || || |
Sbjct 2235 GCGACATTATTAAAAACTCTAAGCATTGGCACAAGTCCATTCGATGTACCATTAGTTC-C 2293
Query 139636 CGGA--TG--GGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCC 139691
|| | || | || || ||| || | | ||| ||||| || || ||||| ||| |
Sbjct 2294 CGAAATTGAAGTACCCTT---AGCACGAATGCAATGAACATTTATACCTATTCCACCGGC 2350
Query 139692 AAATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTC 139751
| |||| ||||| | | || | || | | | || ||| ||| || |
Sbjct 2351 AGATTTTGATATCATCGCACATTGTTCTACAGATTTAAAAATGCCTTCTATAGAATCCGC 2410
Query 139752 CTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAG 139811
||| || | ||||| ||||| || |||||||| | || || | || |||||||
Sbjct 2411 TACCATTGTTAAAAGAAAACATGAAGATAGTTGCGGACGATTGGTTGCAGCAGCAAACAA 2470
Query 139812 AGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCT 139871
|||||| || |||||||| ||| ||| | | | || ||||| || ||
Sbjct 2471 AGTAGGTGATGCATGCGTGAAGTAACGTTCCGAAAGTAGATTATAAGTTTCTATTGCTGC 2530
Query 139872 CACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTG 139922
|||||||| ||||| ||||| | | || ||||| | ||| |||||
Sbjct 2531 ATCAATATCCTCACCGTGTATACCAATCGCAACACGCATTAACATGTGTTG 2581
>seq17788
Length=7208
Score = 152 bits (168), Expect = 5e-32
Identities = 166/217 (76%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| ||||||| || || ||||| || || || || || || ||| | |
Sbjct 2198 ATGCAGATTTTTGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCTTCG 2257
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || ||| ||||| || |||||||||||||| ||||| ||||||
Sbjct 2258 GACACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAA 2317
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
|||||| | |||||||| || |||||| |||| ||| |||| | || | || |||||||
Sbjct 2318 CAACGTCTAATCTTTGCTGGCAAACAGTTGGAAGATGGTCGA-ACAC-TCTCTGATTATA 2375
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
| || || || |||||||| | || ||||| |||||
Sbjct 2376 ATATCCAGAAAGAATCGACTTTGCATTTGGTTTTGCG 2412
>seq489
Length=77466
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| || |||||||| || ||||| | || || || | |
Sbjct 4620 ATGCAGATATTCGTCAAAACTCTCACCGGTAAGACCATTACCTTGGAGGTTGAGCCTTCT 4561
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| |||||||| || || || || || |||
Sbjct 4560 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAAGAGGGCATTCCCCCAGACCAA 4501
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882
|| ||| ||||||||||||| || || ||||| ||| || ||| | || || || ||
Sbjct 4500 CAGCGTCTGATCTTTGCCGGCAAGCAACTGGAAGATG-GACGCACACTTTCCGACTACAA 4442
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||||||||| ||||| || || ||||| | || |||| || ||
Sbjct 4441 CATTCAAAAGGAGTCGACCCTGCATTTGGTACTCCGTCTGCGTGGTGG 4394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449788089300440
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