Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_022096.1
Length=258139
Score E
Sequences producing significant alignments: (Bits) Value
seq8176 91.5 2e-13
seq1420 87.8 3e-12
>seq8176
Length=26989
Score = 91.5 bits (100), Expect = 2e-13
Identities = 184/270 (68%), Gaps = 15/270 (6%)
Strand=Plus/Plus
Query 35580 GTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACG 35639
|| || ||| ||| || || || |||| |||| ||| || ||||| | || || |||
Sbjct 9215 GTTGTATTGGAGAATTCTAGCGTTACATAGCCTTGCCATTCTGGTTCAAAAGGAGTGACG 9274
Query 35640 TTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTG 35699
|| | || || || ||||| || ||||| || || | || | | | |||||||
Sbjct 9275 TT-----TNATGCCGCAACGCGCATAAGTGCTTTTTCCAAGGCAAATCGTTAAGACGTTG 9329
Query 35700 CGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAATCAGG 35759
||||| |||||||| || || || ||||| |||| || |||||||| || ||||| |
Sbjct 9330 CGCGGTATGCGGAAATACTCCACAGTGCGAGCCAAGGCAAAGCTGTTGGGAGGAAT---G 9386
Query 35760 ATGCTGTCA--GCCTT---AACCGGCTGCAGGCACTTGGGATCGAAGTTCTTCGGATCAA 35814
|||| || | |||| || | | | | || ||| || | ||| ||||| |
Sbjct 9387 ATGCAGTAATCACCTTCGAAATCAAC--AAAACTTTTTTCATCAAAATGCTTTGGATCGA 9444
Query 35815 CCACTGCGCTGTTGATGTTGGTGAAGACTT 35844
|||| | |||| ||| |||||||| ||||
Sbjct 9445 CCACAGTACTGTGGATATTGGTGAAAACTT 9474
>seq1420
Length=85926
Score = 87.8 bits (96), Expect = 3e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 122606 GGGTCGTTAGCTCAGTTGGTAGAGCATGGCGCTTTTAACGCCGTGGTCGTTGGTTCGAGT 122665
|||||||||||||||||||||||||| | ||||||| | ||||||| ||||||| |
Sbjct 10610 GGGTCGTTAGCTCAGTTGGTAGAGCAGCGGACTTTTAATCCGTTGGTCGTAGGTTCGAAT 10669
Query 122666 CCAACACGACCCACCA 122681
|| |||||||||||||
Sbjct 10670 CCTACACGACCCACCA 10685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 825715761526920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |