Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2385 113 7e-19 >seq2385 Length=11938 Score = 113 bits (124), Expect = 7e-19 Identities = 183/261 (70%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 2411716 TGGTAATCGCTGCCGCGCACAAATTCGAGACGATCCAGCGGGACGCCAAT-GTGCTGGAG 2411774 || || ||| |||| |||||| | || ||||| || || ||||| | || | || Sbjct 11577 TGATATTCGGTGCCCTTCACAAACTTAAGCTTATCCAAAGGCACACCAATAGAGC-GCAG 11635 Query 2411775 CATGGCCTTGATGGCAAACTCGTACCAGCGGCACCGGTGCTCGACGAGGTCCCACGGCGT 2411834 ||| | |||||| | |||||| | || || | |||| ||| ||| |||| Sbjct 11636 CATTGACTTGATCACCGCCTCGTAGTACTGGGTGCGTAGTTCGAGGAGTGACCAAGGCGC 11695 Query 2411835 CTTGCCATTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCCTCACCCGACATCCGGC 2411894 ||| || || | | |||||||| ||||||||||| || ||||| ||| ||||| Sbjct 11696 CTTCATGTTATCTAAATAGGCGTGCAAATCGGCAAAGAGTATTGTCACCTCACAGCCGGC 11755 Query 2411895 CTGGAGAAAGTCGGCCAGTTTAAAGATGGGCACAAAGTAGCCCAGATGGGGCTTGCCCGT 2411954 || ||| |||||||| | || | ||||||||||||||| | | ||| || ||||| || Sbjct 11756 CTTGAGGAAGTCGGCAATCTTCGACATGGGCACAAAGTAGGCGACATGTGGTTTGCCTGT 11815 Query 2411955 CGGCGCGGTGCCCCAATAAAT 2411975 || ||| |||||||| || || Sbjct 11816 CGTCGCTGTGCCCCAGTAGAT 11836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914174968173647