Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_023579.1 Length=75568 Score E Sequences producing significant alignments: (Bits) Value seq1420 84.2 1e-11 >seq1420 Length=85926 Score = 84.2 bits (92), Expect = 1e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 41787 GGTCGTTAGCTCAGTTGGTTAGAGCACCGGACTTTTAATCCGGTTGTCATTGGTTCGAGG 41846 ||||||||||||||||||| |||||| ||||||||||||||| | ||| | ||||||| Sbjct 10611 GGTCGTTAGCTCAGTTGGT-AGAGCAGCGGACTTTTAATCCGTTGGTCGTAGGTTCGAAT 10669 Query 41847 CCAATACGACCTACCA 41862 || | |||||| |||| Sbjct 10670 CCTACACGACCCACCA 10685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241635439727537